Detailed information NTG0344206

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: EQK02_RS00420
• Genome accession: NZ_CP035746
• Coordinates: 71461..73608 (-)
• Length: 715 a.a.
• NCBI ID: WP_129870078.1
• Uniprot ID: -
• Organism: Leuconostoc mesenteroides strain SRCM103460
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 66461..78608

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQK02_RS00405 (EQK02_00405)	-	67656..68243 (+)	588	WP_002815470.1	helix-turn-helix transcriptional regulator	-
EQK02_RS00410 (EQK02_00410)	-	68301..69038 (+)	738	WP_002815471.1	SDR family NAD(P)-dependent oxidoreductase	-
EQK02_RS10715	-	69154..69279 (+)	126	WP_011679061.1	putative metal homeostasis protein	-
EQK02_RS00415 (EQK02_00415)	-	70094..71458 (-)	1365	WP_242512478.1	bacteriocin secretion accessory protein	-
EQK02_RS00420 (EQK02_00420)	comA	71461..73608 (-)	2148	WP_129870078.1	peptide cleavage/export ABC transporter	Regulator
EQK02_RS00425 (EQK02_00425)	-	73839..74015 (+)	177	WP_010287032.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
EQK02_RS00430 (EQK02_00430)	-	74046..74207 (+)	162	WP_010287029.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
EQK02_RS00440 (EQK02_00440)	-	74666..74803 (+)	138	WP_071951754.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
EQK02_RS00445 (EQK02_00445)	-	74818..74997 (+)	180	WP_010287277.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
EQK02_RS00450 (EQK02_00450)	-	75159..75335 (+)	177	WP_010287275.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
EQK02_RS10720	-	75598..75768 (+)	171	WP_011679066.1	hypothetical protein	-
EQK02_RS00455 (EQK02_00455)	-	75774..75986 (+)	213	WP_025267657.1	hypothetical protein	-
EQK02_RS00460 (EQK02_00460)	-	76259..76984 (-)	726	WP_011679068.1	response regulator transcription factor	-
EQK02_RS00465 (EQK02_00465)	-	76990..78300 (-)	1311	WP_129870079.1	GHKL domain-containing protein	-

Sequence

Protein

• Length: 715 a.a.
• Molecular weight: 80351.28 Da
• Isoelectric Point: 9.1336

>NTDB_id=344206 EQK02_RS00420 WP_129870078.1 71461..73608(-) (comA) [Leuconostoc mesenteroides strain SRCM103460]
MRKFHYISQLEEKDCGVAALAMILKRHGSDVSLANIRERCQTSLSGTTALGLVKAAESFNMDVRPIQADLTLFDMKDLPL
PFIAHVEKKGQYLHYYVVYGFTKNKVIIADPDPTVAKTAMTLQEFSKEWTGVALFMSPSPRYKPFKENKNSILSFLPIIS
RQKGLIANIVVASLLVTLISIAGSYYMQLVIDAYIPSAMSNTLTVVSLGLIATYVLQQLLSFARTYLLTIMGQRLSIEVI
LSYIRHLFELPVNFFATRRTGEIVTRFNDANTIIDAMANTILSLFLDLGITIIVGSVLAIQNTKLFLLSLISFPIYFLIV
YCFMKPFERLNQEQMASNATLSSSIIEDINGIETIKSLTSEKTSYQKIDREFVDYLKKSFAHQKSEAIQNSIKQATQLII
NVLVLWLGAKLVISNQISVGQLVTYNALLGYFTEPFQNIINLQAKLQTATVANRRLNEVYLVKSEFKKSESQELHHNNPH
NIIVDDVSYQYGYQKNILHHFSIKIPFGEKIALVGVSGSGKSTLAKLLVHFISPSAGNIFIGEQNIKHVQRQNLRQHILY
LPQNPYIFTGSILDNLTLGARENTTQEDILHSVELADIKDDIENMPQSYQTEISEEGGMSGGQKQRIALARAPLSNSQIL
ILDESTSNLDVATEKKIIDNLLSLKNKTIIFIAHRLTIAEKVQRVILLEKGIISEDGSHAELIHKKSKYYHLVKH

Nucleotide

• Length: 2148 bp

>NTDB_id=344206 EQK02_RS00420 WP_129870078.1 71461..73608(-) (comA) [Leuconostoc mesenteroides strain SRCM103460]
ATGAGAAAGTTTCATTATATATCACAACTTGAAGAAAAAGATTGTGGCGTAGCAGCACTAGCTATGATTTTAAAGCGACA
CGGCTCAGATGTTTCATTAGCTAACATTCGTGAACGCTGTCAAACATCCTTATCGGGTACAACGGCGCTAGGATTAGTGA
AGGCCGCTGAATCATTCAATATGGATGTCCGTCCTATTCAAGCTGACCTTACCTTATTCGACATGAAAGATTTACCTCTG
CCGTTCATCGCTCATGTTGAGAAAAAAGGTCAATATTTGCATTATTATGTAGTGTACGGATTCACTAAAAACAAAGTTAT
CATTGCAGATCCAGATCCAACAGTTGCTAAAACCGCAATGACGTTACAAGAATTCTCTAAAGAGTGGACTGGTGTAGCAT
TGTTCATGTCGCCTTCACCCAGATATAAACCTTTTAAAGAAAATAAAAACAGTATCCTATCCTTTCTGCCAATTATTAGT
CGACAAAAAGGATTAATTGCTAATATTGTCGTCGCTTCTTTGCTAGTCACTTTAATTAGTATCGCTGGCTCTTATTATAT
GCAACTAGTGATTGATGCTTATATTCCTAGTGCTATGTCTAACACATTAACCGTTGTTTCATTAGGACTCATTGCCACCT
ATGTGTTACAACAGCTACTTAGTTTTGCTCGCACCTATCTGTTAACTATTATGGGACAACGATTATCGATTGAAGTCATA
CTATCATACATACGGCACTTGTTCGAACTACCTGTTAATTTCTTTGCCACACGTCGAACAGGTGAAATTGTAACGCGTTT
TAATGACGCCAACACCATTATTGATGCCATGGCAAATACAATTCTCTCACTTTTTTTAGATTTAGGTATCACGATAATTG
TTGGGAGCGTCTTAGCAATTCAAAATACAAAACTTTTTCTACTATCTCTAATCTCTTTTCCTATCTACTTCTTGATTGTC
TATTGTTTCATGAAGCCATTTGAACGATTGAATCAAGAACAGATGGCAAGTAATGCAACGCTGAGCTCATCTATTATTGA
AGACATCAATGGTATTGAAACCATAAAATCTTTGACAAGCGAGAAGACGAGCTACCAAAAAATTGATCGTGAATTTGTCG
ATTATTTAAAAAAATCCTTTGCCCATCAAAAAAGCGAAGCCATTCAAAATAGTATTAAACAAGCAACTCAACTCATTATC
AATGTGCTCGTTTTATGGTTGGGTGCCAAGCTAGTGATTAGTAATCAAATTAGTGTCGGTCAGTTAGTTACCTATAATGC
ATTACTAGGCTACTTTACTGAACCTTTCCAAAATATTATTAACTTGCAGGCGAAATTACAAACGGCAACGGTTGCTAACC
GACGATTAAACGAAGTCTATCTTGTAAAATCAGAGTTTAAAAAATCAGAATCACAAGAGCTTCATCATAACAACCCTCAT
AACATTATAGTTGACGACGTCAGCTATCAATATGGTTATCAAAAGAACATATTACACCACTTTTCAATTAAGATCCCCTT
TGGTGAAAAAATTGCTCTGGTCGGTGTTAGCGGTTCCGGTAAGTCAACATTAGCCAAACTACTTGTTCATTTTATATCTC
CTAGTGCTGGCAACATTTTTATTGGTGAACAAAACATTAAACACGTTCAACGACAAAATTTAAGGCAACATATTCTTTAT
CTACCACAAAACCCATACATATTTACTGGAAGCATATTAGATAATTTAACACTAGGTGCTCGTGAAAACACAACACAAGA
AGACATCCTACATTCTGTTGAGCTTGCTGACATTAAAGATGACATCGAAAATATGCCACAAAGTTACCAAACCGAAATTT
CAGAGGAAGGCGGCATGTCTGGAGGCCAAAAGCAGCGTATCGCTTTAGCTAGAGCCCCCCTTAGTAATTCTCAAATACTT
ATTTTGGATGAATCAACCAGTAATCTTGATGTCGCAACTGAAAAAAAGATTATTGATAATTTATTATCGCTTAAAAATAA
AACAATCATTTTTATTGCACATCGCCTGACTATTGCTGAAAAAGTCCAACGCGTTATTCTGCTTGAAAAAGGGATCATCA
GTGAAGATGGTAGCCATGCTGAACTTATACATAAAAAATCAAAATACTATCATCTTGTAAAGCATTAA

Domains

Predicted by InterproScan.

• Peptidase C39 family (Peptidase_C39) (3-140)

• ABC transporter transmembrane region (ABC_membrane) (168-436)

• ABC transporter (ABC_tran) (498-647)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus gordonii str. Challis substr. CH1	59.804	99.86	0.597
comA	Streptococcus mitis NCTC 12261	58.006	99.58	0.578
comA	Streptococcus mitis SK321	57.725	99.58	0.575
comA	Streptococcus pneumoniae Rx1	57.444	99.58	0.572
comA	Streptococcus pneumoniae D39	57.444	99.58	0.572
comA	Streptococcus pneumoniae R6	57.444	99.58	0.572
comA	Streptococcus pneumoniae TIGR4	57.163	99.58	0.569
comA/nlmT	Streptococcus mutans UA159	54.149	99.441	0.538