Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | EWA65_RS10575 | Genome accession | NZ_CP035688 |
| Coordinates | 2322971..2323561 (-) | Length | 196 a.a. |
| NCBI ID | WP_000135851.1 | Uniprot ID | A0A067BH58 |
| Organism | Vibrio metoecus strain 08-2459 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2317971..2328561
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EWA65_RS10555 | aroB | 2318898..2319983 (-) | 1086 | WP_195707968.1 | 3-dehydroquinate synthase | - |
| EWA65_RS10560 | aroK | 2320011..2320535 (-) | 525 | WP_000818614.1 | shikimate kinase AroK | - |
| EWA65_RS10565 | pilQ | 2320722..2322437 (-) | 1716 | WP_195707969.1 | type IV pilus secretin PilQ | Machinery gene |
| EWA65_RS10570 | pilP | 2322463..2322981 (-) | 519 | WP_000794742.1 | pilus assembly protein PilP | Machinery gene |
| EWA65_RS10575 | pilO | 2322971..2323561 (-) | 591 | WP_000135851.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| EWA65_RS10580 | pilN | 2323554..2324132 (-) | 579 | WP_000903040.1 | PilN domain-containing protein | Machinery gene |
| EWA65_RS10585 | pilM | 2324122..2325138 (-) | 1017 | WP_055027425.1 | type IV pilus assembly protein PilM | Machinery gene |
| EWA65_RS10590 | - | 2325280..2327757 (+) | 2478 | WP_055027426.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 22853.18 Da Isoelectric Point: 4.3574
>NTDB_id=343707 EWA65_RS10575 WP_000135851.1 2322971..2323561(-) (pilO) [Vibrio metoecus strain 08-2459]
MASFQELELDEMAEWPVLPQLLVILLLMLLVQGAGYWFYLMPKQDEIAALKQEEETVKATLRIKANKVAALPQIQAQLDE
LNERYDFLLRQLPVQKELASMLASVNQLGLDNSLTFTRIDWGERQAQEFLYRLPLNIELTGNYHDIGDFSEAIAKLPRII
NFDDIDWQRVSQESSTLHFRVKAYTYQFKQEVEDEK
MASFQELELDEMAEWPVLPQLLVILLLMLLVQGAGYWFYLMPKQDEIAALKQEEETVKATLRIKANKVAALPQIQAQLDE
LNERYDFLLRQLPVQKELASMLASVNQLGLDNSLTFTRIDWGERQAQEFLYRLPLNIELTGNYHDIGDFSEAIAKLPRII
NFDDIDWQRVSQESSTLHFRVKAYTYQFKQEVEDEK
Nucleotide
Download Length: 591 bp
>NTDB_id=343707 EWA65_RS10575 WP_000135851.1 2322971..2323561(-) (pilO) [Vibrio metoecus strain 08-2459]
ATGGCTAGTTTTCAAGAGTTAGAACTGGACGAAATGGCAGAATGGCCGGTGTTACCCCAATTGCTGGTGATTTTGTTGCT
GATGCTATTGGTGCAAGGCGCAGGATACTGGTTTTATCTGATGCCCAAACAAGATGAGATCGCAGCACTCAAGCAAGAGG
AAGAAACCGTCAAAGCCACGTTACGCATCAAAGCAAACAAAGTGGCTGCTTTACCACAGATCCAAGCTCAATTGGATGAA
TTGAATGAGCGTTACGATTTCTTACTACGCCAACTACCAGTACAAAAAGAGCTAGCCAGTATGCTGGCATCGGTAAACCA
ACTTGGTCTGGATAATTCCCTAACATTTACTCGGATTGATTGGGGGGAGCGTCAGGCTCAAGAGTTTTTGTATCGCCTTC
CTCTCAATATTGAGTTGACTGGGAATTATCACGATATCGGAGATTTTTCCGAGGCAATCGCCAAGTTACCGCGGATTATC
AACTTCGATGACATCGATTGGCAGCGGGTTAGCCAAGAAAGTAGCACGCTGCATTTTCGGGTAAAAGCCTACACCTATCA
GTTTAAGCAGGAGGTGGAAGATGAAAAATAA
ATGGCTAGTTTTCAAGAGTTAGAACTGGACGAAATGGCAGAATGGCCGGTGTTACCCCAATTGCTGGTGATTTTGTTGCT
GATGCTATTGGTGCAAGGCGCAGGATACTGGTTTTATCTGATGCCCAAACAAGATGAGATCGCAGCACTCAAGCAAGAGG
AAGAAACCGTCAAAGCCACGTTACGCATCAAAGCAAACAAAGTGGCTGCTTTACCACAGATCCAAGCTCAATTGGATGAA
TTGAATGAGCGTTACGATTTCTTACTACGCCAACTACCAGTACAAAAAGAGCTAGCCAGTATGCTGGCATCGGTAAACCA
ACTTGGTCTGGATAATTCCCTAACATTTACTCGGATTGATTGGGGGGAGCGTCAGGCTCAAGAGTTTTTGTATCGCCTTC
CTCTCAATATTGAGTTGACTGGGAATTATCACGATATCGGAGATTTTTCCGAGGCAATCGCCAAGTTACCGCGGATTATC
AACTTCGATGACATCGATTGGCAGCGGGTTAGCCAAGAAAGTAGCACGCTGCATTTTCGGGTAAAAGCCTACACCTATCA
GTTTAAGCAGGAGGTGGAAGATGAAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Vibrio cholerae strain A1552 |
90.816 |
100 |
0.908 |
| pilO | Vibrio campbellii strain DS40M4 |
68.783 |
96.429 |
0.663 |