Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   EU243_RS17930 Genome accession   NZ_CP035533
Coordinates   3660907..3661563 (-) Length   218 a.a.
NCBI ID   WP_046559486.1    Uniprot ID   -
Organism   Bacillus velezensis strain DTU001     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3655907..3666563
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EU243_RS17910 (EU243_18180) spxH 3656146..3657048 (+) 903 WP_024085126.1 protease adaptor protein SpxH -
  EU243_RS17915 - 3657334..3657501 (+) 168 WP_003155026.1 hypothetical protein -
  EU243_RS17920 (EU243_18185) pepF 3657539..3659368 (-) 1830 WP_088005489.1 oligoendopeptidase F Regulator
  EU243_RS17925 (EU243_18190) - 3659596..3660756 (-) 1161 WP_046559487.1 competence protein CoiA family protein -
  EU243_RS17930 (EU243_18195) mecA 3660907..3661563 (-) 657 WP_046559486.1 adaptor protein MecA Regulator
  EU243_RS17940 (EU243_18200) - 3661839..3662495 (+) 657 WP_003155033.1 TerC family protein -
  EU243_RS17945 (EU243_18205) spx 3662553..3662948 (-) 396 WP_003155034.1 transcriptional regulator Spx -
  EU243_RS17950 (EU243_18210) - 3663127..3663705 (-) 579 WP_003155035.1 GNAT family N-acetyltransferase -
  EU243_RS17955 (EU243_18215) - 3663823..3665010 (-) 1188 WP_003155036.1 putative glycoside hydrolase -
  EU243_RS17960 (EU243_18220) oppF 3665117..3666034 (-) 918 WP_003155037.1 oligopeptide ABC transporter ATP-binding protein OppF -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25990.79 Da        Isoelectric Point: 4.1143

>NTDB_id=343022 EU243_RS17930 WP_046559486.1 3660907..3661563(-) (mecA) [Bacillus velezensis strain DTU001]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAESREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAHESSVSIHRLEEYGKLVIADHALYTIKKHFPS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=343022 EU243_RS17930 WP_046559486.1 3660907..3661563(-) (mecA) [Bacillus velezensis strain DTU001]
ATGGAAATAGAAAGAATTAATGAGCATACTGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAGGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAGCCGGGAAGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ATGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATCAAAACGACCCTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
CGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGCAAATTGGTGATCGCTGATCATGCGTTATATACAATAAAAA
AACACTTTCCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

88.991

100

0.89

Multiple sequence alignment