Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   F7V86_RS01310 Genome accession   NZ_CP044444
Coordinates   262408..263103 (-) Length   231 a.a.
NCBI ID   WP_014418686.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain KC41     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 257408..268103
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F7V86_RS01290 - 257789..258508 (-) 720 WP_123117398.1 TIGR02206 family membrane protein -
  F7V86_RS01295 - 258616..260556 (-) 1941 WP_014418683.1 FtsX-like permease family protein -
  F7V86_RS01300 - 260553..261308 (-) 756 WP_007408812.1 ABC transporter ATP-binding protein -
  F7V86_RS01305 - 261411..262415 (-) 1005 WP_151140050.1 sensor histidine kinase -
  F7V86_RS01310 braR 262408..263103 (-) 696 WP_014418686.1 response regulator transcription factor Regulator
  F7V86_RS01315 - 263167..264477 (-) 1311 WP_021494489.1 ABC transporter permease -
  F7V86_RS01320 - 264467..265162 (-) 696 WP_007408816.1 ABC transporter ATP-binding protein -
  F7V86_RS01325 - 265178..266158 (-) 981 WP_017418411.1 hypothetical protein -
  F7V86_RS01330 - 266195..267181 (-) 987 WP_025649749.1 ABC transporter permease -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26839.08 Da        Isoelectric Point: 7.1196

>NTDB_id=342602 F7V86_RS01310 WP_014418686.1 262408..263103(-) (braR) [Bacillus amyloliquefaciens strain KC41]
MFHILLIEDDNTLFHEMKERLTGWSFAVHGIKDFSRVIREFSEIKPDLVIIDVQLPKFDGFHWCRMIRSQSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAVFRRVHQYGTEPALMKRWCGAVIDTETNTVSRKNGSVELTKNEMLI
LKLLAEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDQLGIGKMIETKVGQGYIAKEEDGLYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=342602 F7V86_RS01310 WP_014418686.1 262408..263103(-) (braR) [Bacillus amyloliquefaciens strain KC41]
ATGTTTCACATTTTGTTAATAGAAGATGATAACACTTTGTTTCACGAGATGAAAGAGAGATTAACGGGCTGGTCATTTGC
GGTGCACGGAATAAAAGATTTCAGCCGGGTTATCCGGGAGTTTTCTGAAATTAAGCCTGATTTGGTGATCATTGATGTAC
AGCTGCCGAAATTTGACGGCTTTCATTGGTGCAGAATGATACGCTCCCAATCAAACGTGCCGATTCTCTTTTTGTCCTCA
CGCGATCATCCCGCGGATATGGTCATGTCGATGCAGCTCGGGGCAGATGATTTTATTCAGAAGCCTTTTCACTTTGATGT
GTTAATCGCGAAAATACAGGCGGTGTTCCGCCGTGTGCACCAATACGGCACAGAACCGGCGCTGATGAAAAGATGGTGCG
GGGCGGTCATTGACACAGAAACCAACACGGTCAGCCGTAAAAACGGTTCGGTCGAGCTGACCAAAAACGAAATGCTGATC
TTAAAACTGCTGGCTGAGCAGAAAAATAAAATCGTCAGCCGGGAAGAACTCATCAGAAGCCTATGGAATGATGAGCGTTT
CGTCAGTGATAATACGCTGACGGTGAATGTCAACCGGCTGCGGAAAAAACTCGATCAATTAGGCATCGGGAAAATGATTG
AAACCAAGGTGGGGCAGGGATACATCGCAAAGGAAGAAGACGGTCTTTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(4-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.639

94.805

0.385

Multiple sequence alignment