Detailed information    

insolico Bioinformatically predicted

Overview


Name   comA/nlmT   Type   Regulator
Locus tag   ETT61_RS02675 Genome accession   NZ_CP035438
Coordinates   483429..485582 (-) Length   717 a.a.
NCBI ID   WP_136020169.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm22.8     
Function   transport of ComC (predicted from homology)   
Competence regulation

Genomic Context


Location: 478429..490582
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT61_RS02655 (ETT61_02655) comE/blpR 479620..480369 (+) 750 WP_030126108.1 response regulator transcription factor Regulator
  ETT61_RS02660 (ETT61_02660) - 480370..481704 (+) 1335 WP_063631787.1 sensor histidine kinase -
  ETT61_RS02665 (ETT61_02665) - 481852..481977 (-) 126 WP_011017462.1 ComC/BlpC family leader-containing pheromone/bacteriocin -
  ETT61_RS02670 (ETT61_02670) - 482054..483418 (-) 1365 WP_136020168.1 bacteriocin secretion accessory protein -
  ETT61_RS02675 (ETT61_02675) comA/nlmT 483429..485582 (-) 2154 WP_136020169.1 peptide cleavage/export ABC transporter Regulator
  ETT61_RS02685 (ETT61_02685) - 486174..486401 (+) 228 WP_111713896.1 Blp family class II bacteriocin -
  ETT61_RS02690 (ETT61_02690) - 486414..486614 (+) 201 WP_003060803.1 class IIb bacteriocin, lactobin A/cerein 7B family -
  ETT61_RS10520 (ETT61_02700) - 486930..487103 (+) 174 WP_315940771.1 bacteriocin -
  ETT61_RS02705 (ETT61_02705) - 487153..487413 (+) 261 WP_136020170.1 hypothetical protein -
  ETT61_RS02710 (ETT61_02710) - 487629..488030 (+) 402 WP_053308564.1 hypothetical protein -
  ETT61_RS02715 (ETT61_02715) - 488368..488568 (+) 201 Protein_468 histidine kinase -
  ETT61_RS02720 (ETT61_02720) stcA 488916..489185 (-) 270 WP_020833327.1 quorum-sensing system protein StcA -
  ETT61_RS10525 (ETT61_02725) - 489707..489949 (-) 243 WP_002985713.1 hypothetical protein -
  ETT61_RS02730 shp2 490099..490167 (-) 69 WP_128650799.1 peptide pheromone SHP2 -

Sequence


Protein


Download         Length: 717 a.a.        Molecular weight: 80594.76 Da        Isoelectric Point: 7.3261

>NTDB_id=341584 ETT61_RS02675 WP_136020169.1 483429..485582(-) (comA/nlmT) [Streptococcus pyogenes strain emm22.8]
MISYRKTFVAQIDAIDCGVAALASIAKYYGSDYSLAHLRELAKTNKEGTTALGIVKAAKLMGFETRAIQADMTLFDIEDV
PYPFIVHVNKEGKFQHYYVVYQNKKNYLIIGDPDPTVKVTKMTKERFTSEWTGVAIFLAPEPSYKPHKDKKNGLISFLPL
IFKQRSLIFYIILASLLVTLINIVGSYYLQGILDDYIPNQLKSTLGIISIGLIITYILKQMMSFSRDYLLTVLSQRLSID
VILSYIRHIFELPMSFFATRRTGEIISRFTDANAIIDALASTILSLFLDVSILTIVGTVLLVQNTNLFLLSLVSVPLYIV
IIFIFMHPFEKMNNDVMQSNSMVSSAIIEDINGIETIKSLTNEENRYQKIDSEFVDYLDKSFKLSKYSILQSSLKQGAQL
ILNVIVLWFGAKLVMGGKISVGQLITFNTLLSYFTNPLENIINLQTKLESAKVANNRLNEVYLVKSEFQKEQALTDTYCL
YGDIQFADLSYKYGFGRDTLSDISLTIKEGEKVSIVGINGSGKTTLAKMIVNFFEPYKGQISINHQNLKMIDKKVLRQHI
NYLPQQAYIFSGSILENLTLGANDCTSHEDILRACEVAEIRQDIEQMPMGYQTELSDGAGLSGGQKQRIALARALLTKAP
VLILDEATSGLDVLTEKRVIDNLLAMTDKTIIFVAHRLSISARTNQVIVLDEGKIIEIGSHQELMTKQGFYHHLFSS

Nucleotide


Download         Length: 2154 bp        

>NTDB_id=341584 ETT61_RS02675 WP_136020169.1 483429..485582(-) (comA/nlmT) [Streptococcus pyogenes strain emm22.8]
ATGATATCCTATCGAAAAACATTTGTTGCTCAGATTGATGCTATAGACTGTGGTGTGGCTGCTCTTGCTTCCATCGCTAA
ATATTACGGTTCAGACTACTCTTTAGCTCATTTAAGAGAGTTAGCTAAAACAAATAAAGAGGGAACAACAGCGCTTGGCA
TCGTCAAAGCTGCCAAATTAATGGGATTTGAAACAAGAGCTATTCAAGCAGACATGACCCTCTTTGATATAGAAGATGTC
CCTTATCCTTTTATTGTTCATGTTAATAAAGAAGGTAAATTCCAACACTACTATGTCGTCTATCAAAACAAAAAAAATTA
TCTGATAATCGGCGACCCTGACCCGACAGTAAAAGTCACTAAGATGACAAAGGAGCGATTTACTTCTGAATGGACGGGTG
TCGCTATTTTTCTAGCACCCGAGCCCAGCTACAAGCCTCATAAGGACAAAAAGAACGGTCTAATAAGCTTTTTACCTCTC
ATTTTTAAACAGCGATCTCTGATTTTCTATATCATATTAGCTAGCCTACTCGTTACTCTGATTAATATTGTAGGTTCTTA
TTACCTACAAGGTATATTAGATGACTATATTCCAAATCAACTGAAATCAACACTCGGCATTATTTCAATTGGTCTTATCA
TTACCTATATCCTCAAACAGATGATGAGTTTTTCGCGAGATTATCTCCTGACTGTACTGAGTCAGCGATTAAGCATTGAC
GTCATTTTATCTTACATTCGCCATATTTTTGAGCTTCCCATGTCTTTTTTTGCAACTCGCAGAACAGGAGAAATCATTTC
ACGGTTTACAGATGCTAATGCTATTATTGATGCACTCGCTTCTACTATTTTGTCTCTTTTTCTTGATGTCAGTATTTTAA
CTATCGTAGGGACAGTCCTGTTAGTGCAAAATACCAATCTTTTTCTTCTATCTCTGGTTTCAGTCCCTCTATATATTGTT
ATTATCTTTATATTTATGCACCCATTTGAAAAGATGAATAATGATGTCATGCAGAGTAACTCTATGGTTAGCTCAGCCAT
TATCGAAGATATCAATGGCATTGAAACTATTAAATCACTGACCAATGAAGAAAATCGTTATCAGAAAATTGATAGTGAAT
TTGTGGACTATCTGGATAAATCTTTCAAGTTAAGTAAGTACTCTATTTTACAAAGCAGTCTCAAACAAGGGGCGCAACTA
ATCCTTAACGTGATAGTCTTATGGTTTGGGGCCAAATTAGTTATGGGAGGAAAAATTTCTGTTGGTCAGTTGATTACGTT
TAATACTCTCTTATCTTATTTTACCAATCCTTTAGAAAATATCATTAATCTTCAAACTAAACTGGAATCCGCTAAGGTTG
CCAATAATCGGCTTAATGAAGTTTACCTGGTTAAATCTGAGTTCCAAAAAGAACAGGCATTAACAGATACCTATTGTCTA
TATGGAGATATCCAATTTGCAGACTTGTCTTATAAATACGGCTTTGGTCGTGATACCTTATCTGATATCAGTTTGACCAT
TAAGGAGGGTGAAAAAGTCAGTATAGTTGGTATTAATGGTTCTGGCAAGACAACATTAGCTAAAATGATTGTTAATTTCT
TTGAACCTTACAAGGGACAGATTTCTATTAATCATCAAAATCTTAAAATGATTGATAAAAAAGTACTTCGTCAGCATATC
AACTATCTCCCCCAACAAGCTTATATCTTTAGTGGATCTATCTTAGAAAATTTAACCTTAGGTGCTAATGACTGTACTAG
TCATGAAGATATTCTAAGAGCTTGTGAGGTTGCAGAAATTCGACAAGATATTGAACAAATGCCTATGGGCTATCAAACAG
AGCTTTCTGATGGTGCCGGACTCTCAGGAGGCCAAAAGCAACGAATTGCACTTGCCAGAGCTCTCCTAACCAAGGCGCCT
GTGCTTATTCTAGATGAGGCTACAAGCGGTCTTGACGTACTAACTGAAAAGAGGGTTATTGATAATCTTTTGGCTATGAC
GGATAAAACTATTATTTTCGTAGCTCATCGTCTCAGCATTTCAGCGCGGACCAATCAAGTCATTGTGCTTGATGAGGGCA
AAATTATTGAAATAGGATCTCATCAAGAATTAATGACTAAACAAGGTTTCTATCATCATTTATTTAGTAGTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/nlmT Streptococcus mutans UA159

71.888

99.721

0.717

  comA Streptococcus mitis NCTC 12261

66.807

99.582

0.665

  comA Streptococcus mitis SK321

66.387

99.582

0.661

  comA Streptococcus pneumoniae Rx1

66.387

99.582

0.661

  comA Streptococcus pneumoniae D39

66.387

99.582

0.661

  comA Streptococcus pneumoniae R6

66.387

99.582

0.661

  comA Streptococcus pneumoniae TIGR4

66.106

99.582

0.658

  comA Streptococcus gordonii str. Challis substr. CH1

65.46

100

0.656


Multiple sequence alignment