Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | ETL58_RS12605 | Genome accession | NZ_CP035413 |
| Coordinates | 2438337..2438672 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis strain SRCM103629 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2433337..2443672
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ETL58_RS12585 (ETL58_12585) | gcvT | 2433929..2435017 (-) | 1089 | WP_015251720.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| ETL58_RS12590 (ETL58_12590) | hepAA | 2435459..2437132 (+) | 1674 | WP_004398544.1 | SNF2-related protein | - |
| ETL58_RS12595 (ETL58_12595) | yqhG | 2437153..2437947 (+) | 795 | WP_003230200.1 | YqhG family protein | - |
| ETL58_RS12600 (ETL58_12600) | sinI | 2438130..2438303 (+) | 174 | WP_003230187.1 | anti-repressor SinI | Regulator |
| ETL58_RS12605 (ETL58_12605) | sinR | 2438337..2438672 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| ETL58_RS12610 (ETL58_12610) | tasA | 2438765..2439550 (-) | 786 | WP_015251717.1 | biofilm matrix protein TasA | - |
| ETL58_RS12615 (ETL58_12615) | sipW | 2439614..2440186 (-) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| ETL58_RS12620 (ETL58_12620) | tapA | 2440170..2440931 (-) | 762 | WP_015251716.1 | amyloid fiber anchoring/assembly protein TapA | - |
| ETL58_RS12625 (ETL58_12625) | yqzG | 2441203..2441529 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| ETL58_RS12630 (ETL58_12630) | spoIITA | 2441571..2441750 (-) | 180 | WP_003230176.1 | YqzE family protein | - |
| ETL58_RS12635 (ETL58_12635) | comGG | 2441821..2442195 (-) | 375 | WP_015251714.1 | ComG operon protein ComGG | Machinery gene |
| ETL58_RS12640 (ETL58_12640) | comGF | 2442196..2442579 (-) | 384 | WP_015251713.1 | ComG operon protein ComGF | Machinery gene |
| ETL58_RS12645 (ETL58_12645) | comGE | 2442605..2442952 (-) | 348 | WP_003230165.1 | ComG operon protein 5 | Machinery gene |
| ETL58_RS12650 (ETL58_12650) | comGD | 2442936..2443367 (-) | 432 | WP_004398628.1 | comG operon protein ComGD | Machinery gene |
| ETL58_RS12655 (ETL58_12655) | comGC | 2443357..2443653 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=340797 ETL58_RS12605 WP_003226345.1 2438337..2438672(+) (sinR) [Bacillus subtilis strain SRCM103629]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=340797 ETL58_RS12605 WP_003226345.1 2438337..2438672(+) (sinR) [Bacillus subtilis strain SRCM103629]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |