Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | ETK61_RS13590 | Genome accession | NZ_CP035406 |
| Coordinates | 2499346..2499681 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis strain SRCM103612 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2494346..2504681
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ETK61_RS13570 (ETK61_13575) | gcvT | 2494938..2496026 (-) | 1089 | WP_129137784.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| ETK61_RS13575 (ETK61_13580) | hepAA | 2496468..2498141 (+) | 1674 | WP_004398544.1 | SNF2-related protein | - |
| ETK61_RS13580 (ETK61_13585) | yqhG | 2498162..2498956 (+) | 795 | WP_003230200.1 | YqhG family protein | - |
| ETK61_RS13585 (ETK61_13590) | sinI | 2499139..2499312 (+) | 174 | WP_003230187.1 | anti-repressor SinI | Regulator |
| ETK61_RS13590 (ETK61_13595) | sinR | 2499346..2499681 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| ETK61_RS13595 (ETK61_13600) | tasA | 2499774..2500559 (-) | 786 | WP_004398632.1 | biofilm matrix protein TasA | - |
| ETK61_RS13600 (ETK61_13605) | sipW | 2500623..2501195 (-) | 573 | WP_080031082.1 | signal peptidase I SipW | - |
| ETK61_RS13605 (ETK61_13610) | tapA | 2501179..2501934 (-) | 756 | WP_129137785.1 | amyloid fiber anchoring/assembly protein TapA | - |
| ETK61_RS13610 (ETK61_13615) | yqzG | 2502206..2502532 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| ETK61_RS13615 (ETK61_13620) | spoIITA | 2502574..2502753 (-) | 180 | WP_003230176.1 | YqzE family protein | - |
| ETK61_RS13620 (ETK61_13625) | comGG | 2502824..2503198 (-) | 375 | WP_029726722.1 | ComG operon protein ComGG | Machinery gene |
| ETK61_RS13625 (ETK61_13630) | comGF | 2503199..2503582 (-) | 384 | WP_029317913.1 | ComG operon protein ComGF | Machinery gene |
| ETK61_RS13630 (ETK61_13635) | comGE | 2503608..2503955 (-) | 348 | WP_014480255.1 | ComG operon protein 5 | Machinery gene |
| ETK61_RS13635 (ETK61_13640) | comGD | 2503939..2504370 (-) | 432 | WP_014480256.1 | comG operon protein ComGD | Machinery gene |
| ETK61_RS13640 (ETK61_13645) | comGC | 2504360..2504656 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=340562 ETK61_RS13590 WP_003226345.1 2499346..2499681(+) (sinR) [Bacillus subtilis strain SRCM103612]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=340562 ETK61_RS13590 WP_003226345.1 2499346..2499681(+) (sinR) [Bacillus subtilis strain SRCM103612]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |