Detailed information NTG0340367

Bioinformatically predicted

Overview

• Name: comGF
• Type: Machinery gene
• Locus tag: FOB77_RS03080
• Genome accession: NZ_CP044091
• Coordinates: 557456..557917 (-)
• Length: 153 a.a.
• NCBI ID: WP_001874060.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae strain FDAARGOS_669
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 552456..562917

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOB77_RS03045 (FOB77_03045)	-	553010..553675 (-)	666	WP_000008111.1	CPBP family intramembrane glutamic endopeptidase	-
FOB77_RS03050 (FOB77_03050)	-	553744..554199 (-)	456	WP_000905674.1	hypothetical protein	-
FOB77_RS03055 (FOB77_03055)	-	554240..554377 (-)	138	WP_001867090.1	hypothetical protein	-
FOB77_RS03060 (FOB77_03060)	-	554436..554642 (-)	207	WP_000798242.1	helix-turn-helix transcriptional regulator	-
FOB77_RS03065 (FOB77_03065)	-	554793..555986 (-)	1194	WP_000047535.1	acetate kinase	-
FOB77_RS03070 (FOB77_03070)	comGH	556018..556992 (-)	975	WP_001008570.1	class I SAM-dependent methyltransferase	Machinery gene
FOB77_RS03075 (FOB77_03075)	comGG	557107..557478 (-)	372	WP_000601104.1	competence type IV pilus minor pilin ComGG	Machinery gene
FOB77_RS03080 (FOB77_03080)	comGF	557456..557917 (-)	462	WP_001874060.1	competence type IV pilus minor pilin ComGF	Machinery gene
FOB77_RS03085 (FOB77_03085)	comGE	557871..558170 (-)	300	WP_001867089.1	competence type IV pilus minor pilin ComGE	Machinery gene
FOB77_RS03090 (FOB77_03090)	comGD	558142..558570 (-)	429	WP_000793381.1	competence type IV pilus minor pilin ComGD	Machinery gene
FOB77_RS03095 (FOB77_03095)	comGB	558567..559610 (-)	1044	WP_223295592.1	competence type IV pilus assembly protein ComGB	Machinery gene
FOB77_RS03100 (FOB77_03100)	comGA	559504..560475 (-)	972	WP_025197279.1	competence type IV pilus ATPase ComGA	Machinery gene
FOB77_RS03110 (FOB77_03110)	-	560648..561013 (-)	366	WP_000285373.1	DUF1033 family protein	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17861.86 Da
• Isoelectric Point: 9.8392

>NTDB_id=340367 FOB77_RS03080 WP_001874060.1 557456..557917(-) (comGF) [Streptococcus agalactiae strain FDAARGOS_669]
MKVIRKFCTYQKLRVKAFTLLECLVALVTITGALLVYQGLTKLLAQQIVVMSSSSQSEWVLLTQQLNAEFEGAHLEYLRQ
NKLYLRKQDKIVTFGKSNKDDFRKTGYDGRGYQPMVYGLDNCQMSQTKSMVKLVFYFKDGLKRTFYYDFKEET

Nucleotide

• Length: 462 bp

>NTDB_id=340367 FOB77_RS03080 WP_001874060.1 557456..557917(-) (comGF) [Streptococcus agalactiae strain FDAARGOS_669]
TTGAAGGTAATAAGGAAATTTTGCACGTATCAAAAGTTAAGGGTTAAAGCATTTACGCTTTTAGAATGTTTGGTAGCATT
GGTTACAATCACAGGAGCTTTACTAGTTTATCAAGGACTGACAAAATTGTTGGCTCAACAGATAGTAGTGATGTCTTCTT
CCAGTCAGTCTGAATGGGTGTTATTAACTCAGCAACTAAATGCAGAATTCGAAGGCGCTCACTTGGAATATTTAAGACAG
AACAAACTTTATTTACGTAAGCAAGATAAGATTGTAACCTTTGGCAAATCTAATAAAGATGATTTCCGTAAGACAGGTTA
TGATGGTCGAGGTTATCAACCAATGGTTTATGGGTTAGACAATTGTCAAATGAGTCAAACCAAAAGTATGGTAAAACTTG
TTTTTTATTTTAAGGACGGGTTAAAAAGGACATTTTACTATGATTTTAAAGAAGAAACTTAA

Domains

Predicted by InterProScan.

• Putative Competence protein ComGF (ComGF) (49-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF	Streptococcus mutans UA159	47.887	92.81	0.444
comGF	Streptococcus mutans UA140	47.887	92.81	0.444
comGF/cglF	Streptococcus pneumoniae Rx1	43.165	90.85	0.392
comGF/cglF	Streptococcus pneumoniae D39	43.165	90.85	0.392
comGF/cglF	Streptococcus pneumoniae R6	43.165	90.85	0.392
comGF/cglF	Streptococcus pneumoniae TIGR4	43.165	90.85	0.392
comGF/cglF	Streptococcus mitis SK321	44.03	87.582	0.386
comGF/cglF	Streptococcus mitis NCTC 12261	43.284	87.582	0.379
comGF	Lactococcus lactis subsp. cremoris KW2	40.714	91.503	0.373