Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   ETA12_RS15935 Genome accession   NZ_CP035399
Coordinates   3174108..3176411 (-) Length   767 a.a.
NCBI ID   WP_070082286.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM103788     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3169108..3181411
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETA12_RS15895 (ETA12_15895) - 3169568..3169999 (+) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -
  ETA12_RS15900 (ETA12_15900) - 3169999..3170340 (+) 342 WP_022553706.1 Na(+)/H(+) antiporter subunit C -
  ETA12_RS15905 (ETA12_15905) - 3170333..3171814 (+) 1482 WP_128974217.1 Na+/H+ antiporter subunit D -
  ETA12_RS15910 (ETA12_15910) - 3171820..3172296 (+) 477 WP_129093768.1 Na+/H+ antiporter subunit E -
  ETA12_RS15915 (ETA12_15915) - 3172296..3172580 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  ETA12_RS15920 (ETA12_15920) mnhG 3172564..3172938 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  ETA12_RS15925 (ETA12_15925) - 3172978..3173361 (-) 384 WP_003152054.1 hotdog fold thioesterase -
  ETA12_RS15930 (ETA12_15930) comA 3173383..3174027 (-) 645 WP_129093769.1 response regulator transcription factor Regulator
  ETA12_RS15935 (ETA12_15935) comP 3174108..3176411 (-) 2304 WP_070082286.1 histidine kinase Regulator
  ETA12_RS15940 (ETA12_15940) comX 3176431..3176610 (-) 180 WP_318010531.1 competence pheromone ComX -
  ETA12_RS15945 (ETA12_15945) comQ 3176564..3177550 (-) 987 WP_269321599.1 class 1 isoprenoid biosynthesis enzyme Regulator
  ETA12_RS15950 (ETA12_15950) degQ 3177681..3177821 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  ETA12_RS15960 (ETA12_15960) - 3178286..3178627 (+) 342 WP_021495366.1 hypothetical protein -
  ETA12_RS15965 (ETA12_15965) - 3178634..3179857 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 767 a.a.        Molecular weight: 89000.47 Da        Isoelectric Point: 8.5629

>NTDB_id=340040 ETA12_RS15935 WP_070082286.1 3174108..3176411(-) (comP) [Bacillus velezensis strain SRCM103788]
MKKLIKPFTISIIILSVIYVCYVAFINMNGLIVGTKIVENKHKVLEVAEMSKTSYGKFVGLKQGDMIVKINNKKPSLKYL
KGDTLYHVKSLDIKRNGQQIHLDDFDIVNLNGYYSYFLFVLPLVFYFLSLICIFYIVKVSQTRKSIAGYVLILFLLDISI
AYMSAGGPSRGHEFNRYINLFTFIASPIFYLQFIQEYFKELGKKFANRLISFLYIIPIINLLNEPFRHIYSYDFTTNLNL
VSFFFVTLYAFISVFYHLYKFKYSEHAYILKILILTNTLSFLPFLLFYVIPIILTGSYILDALAAASLLVLIPLGLVYQF
VANKIFDIEFILGRMRYYGLLALVPALFIVGISAWFESIDIQMNPAQQTVFFFIVIFVIFYFKEVMDYKFRLKRFSEKFN
YQDSIFKYTQLIRSITSLKQMFKELKKTILDVLLVSKAYVFEVTSEGDILYHDKKDNEPDWEMYSKEFKKVTSEIGKIIE
LNRGFLIKIGERGGSSYVLLCLSTINTPRLTRDEISWLKTLSFYTSVSMENVIQIEELMNHLQDLKQQGSNPVWLKKLMF
TIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCHIEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLG
LVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVG
CNQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2304 bp        

>NTDB_id=340040 ETA12_RS15935 WP_070082286.1 3174108..3176411(-) (comP) [Bacillus velezensis strain SRCM103788]
TTGAAGAAGCTTATAAAGCCATTTACAATATCCATTATTATTTTAAGTGTTATCTATGTTTGTTATGTCGCTTTTATTAA
CATGAATGGACTTATTGTAGGCACGAAAATTGTAGAAAATAAGCATAAAGTACTCGAAGTTGCTGAAATGTCAAAAACCT
CGTATGGAAAATTTGTAGGTTTAAAACAAGGTGATATGATTGTCAAAATTAATAATAAAAAACCATCTTTAAAATATCTA
AAAGGGGATACTCTCTACCACGTTAAGAGCTTAGATATAAAAAGAAATGGACAGCAAATTCATTTAGATGATTTTGATAT
TGTTAATTTAAATGGATACTACAGTTACTTTTTATTTGTCCTTCCCCTTGTATTTTATTTTTTGAGTTTAATATGTATAT
TTTATATTGTAAAGGTGAGTCAAACCAGAAAATCGATAGCTGGGTATGTCCTAATTCTCTTCCTGTTAGATATCTCAATA
GCTTATATGAGTGCTGGTGGTCCCTCAAGAGGTCATGAATTTAACAGATATATAAATTTGTTTACCTTCATTGCCTCACC
TATATTTTATCTCCAGTTTATTCAAGAGTATTTCAAGGAATTAGGTAAAAAATTTGCCAATCGCTTGATTTCTTTTCTAT
ATATCATACCGATAATTAATCTCTTAAACGAACCGTTTCGACATATTTATTCATATGACTTCACAACAAATTTAAATTTA
GTATCGTTTTTCTTCGTGACTCTCTATGCATTTATATCTGTTTTCTATCATCTGTATAAATTCAAGTATTCAGAACATGC
TTATATTCTTAAGATTTTAATTTTAACAAACACGCTCTCTTTTTTACCTTTTTTGCTTTTTTATGTAATCCCAATTATTT
TGACAGGAAGTTATATATTAGATGCGTTGGCAGCGGCATCCCTGCTCGTACTTATCCCATTGGGATTGGTATACCAGTTC
GTAGCTAACAAAATTTTTGATATTGAATTCATTTTAGGCAGGATGAGGTACTATGGCTTGCTTGCCTTAGTTCCAGCCCT
TTTTATTGTTGGGATTTCAGCTTGGTTCGAGTCAATAGATATACAAATGAATCCTGCTCAGCAAACTGTATTTTTCTTTA
TTGTGATATTTGTCATTTTTTATTTTAAAGAAGTAATGGATTATAAATTTCGGTTAAAACGTTTTTCTGAAAAATTTAAT
TATCAAGATAGTATATTCAAATATACTCAGCTTATCAGAAGCATAACATCTTTAAAACAAATGTTTAAAGAACTAAAAAA
GACGATTCTGGATGTTCTACTTGTCAGTAAAGCTTATGTCTTTGAAGTTACCTCTGAGGGTGACATTTTATATCATGATA
AAAAGGATAATGAGCCTGACTGGGAAATGTATTCAAAAGAATTTAAGAAAGTTACTTCAGAGATTGGAAAAATCATTGAG
CTAAACCGCGGTTTTTTAATCAAGATAGGAGAACGCGGAGGAAGTTCTTATGTTTTGCTTTGTTTGTCTACTATTAATAC
ACCGAGACTGACACGAGATGAGATTTCATGGCTGAAGACATTGTCTTTCTATACGAGTGTCTCTATGGAAAATGTGATAC
AGATCGAAGAACTCATGAACCATTTACAAGACCTGAAACAACAAGGTTCAAACCCGGTTTGGCTCAAAAAGCTGATGTTT
ACGATCGAGGAAAAGCAGCGGTCGGATTTGGCCCGGGATCTGCATGATTCGGTGCTGCAGGACTTGATTTCTTTGAAGCG
CCAGTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAAGAGCCTTGCCACATAGAGGTGCAGGACAAGCTTCATCAGATGA
ATGAGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGTCCTCAGCTGCTGTATGATTTGGGT
CTGGTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTT
TACGGCGGCGCTGGATTTGGATACCCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGAAGCATT
CACAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGC
TGCAATCAGGAAGAAGGCGGCGGACAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAACGCGTCCGTGCGCTTGACGG
ACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains


Predicted by InterproScan.

(567-636)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

73.247

100

0.735


Multiple sequence alignment