Detailed information
Bioinformatically predicted
Overview
| Name | comGE/cglE | Type | Machinery gene |
| Locus tag | EQH17_RS09530 | Genome accession | NZ_CP035263 |
| Coordinates | 1898406..1898708 (-) | Length | 100 a.a. |
| NCBI ID | WP_000413382.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain TVO_1901922 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1893406..1903708
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQH17_RS09500 (EQH17_10060) | rnpA | 1894093..1894464 (-) | 372 | WP_000739246.1 | ribonuclease P protein component | - |
| EQH17_RS09505 (EQH17_10065) | - | 1894612..1895802 (-) | 1191 | WP_000167755.1 | acetate kinase | - |
| EQH17_RS09510 (EQH17_10070) | comYH | 1895853..1896806 (-) | 954 | WP_000345084.1 | class I SAM-dependent methyltransferase | Machinery gene |
| EQH17_RS09515 (EQH17_10075) | - | 1896867..1897454 (-) | 588 | Protein_1872 | class I SAM-dependent methyltransferase | - |
| EQH17_RS09520 (EQH17_10080) | comGG/cglG | 1897591..1898004 (-) | 414 | WP_000265617.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| EQH17_RS09525 (EQH17_10085) | comGF/cglF | 1897982..1898443 (-) | 462 | WP_000250529.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| EQH17_RS09530 (EQH17_10090) | comGE/cglE | 1898406..1898708 (-) | 303 | WP_000413382.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| EQH17_RS09535 (EQH17_10095) | comGD/cglD | 1898671..1899075 (-) | 405 | WP_000588002.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| EQH17_RS09540 (EQH17_10100) | comGC/cglC | 1899068..1899334 (-) | 267 | WP_000962026.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| EQH17_RS09545 (EQH17_10105) | - | 1899336..1899593 (-) | 258 | WP_000698511.1 | hypothetical protein | - |
| EQH17_RS09550 (EQH17_10110) | lytA | 1899825..1900781 (-) | 957 | WP_061632303.1 | N-acetylmuramoyl-L-alanine amidase LytA | - |
| EQH17_RS09555 (EQH17_10115) | - | 1900785..1901117 (-) | 333 | WP_061632304.1 | phage holin | - |
| EQH17_RS09560 (EQH17_10120) | - | 1901121..1901537 (-) | 417 | WP_001165341.1 | phage holin family protein | - |
| EQH17_RS09565 (EQH17_10125) | - | 1901547..1901897 (-) | 351 | WP_000852244.1 | hypothetical protein | - |
| EQH17_RS09570 (EQH17_10130) | - | 1901900..1902103 (-) | 204 | WP_001091119.1 | hypothetical protein | - |
| EQH17_RS11115 (EQH17_10135) | - | 1902084..1902201 (-) | 118 | Protein_1884 | dihydrodipicolinate reductase | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 11108.08 Da Isoelectric Point: 9.7273
>NTDB_id=338570 EQH17_RS09530 WP_000413382.1 1898406..1898708(-) (comGE/cglE) [Streptococcus pneumoniae strain TVO_1901922]
MEKLNALRKQKIRAVILLEAVVALAIFASIATLLLGQIQKNRQEEAKILQKEEVLRVAKMALQTGQNQVSINGVEIQVFS
SEKGLEVYHGSEQLLAIKEP
MEKLNALRKQKIRAVILLEAVVALAIFASIATLLLGQIQKNRQEEAKILQKEEVLRVAKMALQTGQNQVSINGVEIQVFS
SEKGLEVYHGSEQLLAIKEP
Nucleotide
Download Length: 303 bp
>NTDB_id=338570 EQH17_RS09530 WP_000413382.1 1898406..1898708(-) (comGE/cglE) [Streptococcus pneumoniae strain TVO_1901922]
ATGGAAAAATTAAACGCATTAAGGAAACAAAAAATTAGGGCAGTGATTTTACTGGAAGCAGTAGTCGCTCTAGCTATCTT
TGCCAGCATTGCGACCCTCCTTTTGGGACAAATTCAAAAAAATAGGCAAGAGGAAGCAAAAATCTTGCAAAAGGAAGAAG
TCTTGAGGGTAGCTAAGATGGCCCTGCAGACGGGGCAAAATCAGGTAAGCATCAACGGAGTTGAGATTCAGGTATTTTCT
AGTGAAAAAGGATTGGAGGTCTACCATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAA
ATGGAAAAATTAAACGCATTAAGGAAACAAAAAATTAGGGCAGTGATTTTACTGGAAGCAGTAGTCGCTCTAGCTATCTT
TGCCAGCATTGCGACCCTCCTTTTGGGACAAATTCAAAAAAATAGGCAAGAGGAAGCAAAAATCTTGCAAAAGGAAGAAG
TCTTGAGGGTAGCTAAGATGGCCCTGCAGACGGGGCAAAATCAGGTAAGCATCAACGGAGTTGAGATTCAGGTATTTTCT
AGTGAAAAAGGATTGGAGGTCTACCATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE/cglE | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus pneumoniae TIGR4 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus mitis NCTC 12261 |
98 |
100 |
0.98 |
| comGE/cglE | Streptococcus mitis SK321 |
98 |
100 |
0.98 |
| comYE | Streptococcus mutans UA140 |
44.444 |
90 |
0.4 |
| comYE | Streptococcus mutans UA159 |
44.444 |
90 |
0.4 |