Detailed information
Bioinformatically predicted
Overview
| Name | micA | Type | Regulator |
| Locus tag | EQH18_RS05160 | Genome accession | NZ_CP035262 |
| Coordinates | 1026878..1027582 (+) | Length | 234 a.a. |
| NCBI ID | WP_000722076.1 | Uniprot ID | Q9S1K0 |
| Organism | Streptococcus pneumoniae strain TVO_1901923 | ||
| Function | repress competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1021878..1032582
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQH18_RS05140 (EQH18_05425) | coaC | 1022167..1022718 (-) | 552 | WP_001284128.1 | phosphopantothenoylcysteine decarboxylase | - |
| EQH18_RS05145 (EQH18_05430) | coaB | 1022730..1023419 (-) | 690 | WP_000699488.1 | phosphopantothenate--cysteine ligase | - |
| EQH18_RS05150 (EQH18_05435) | - | 1023649..1025319 (+) | 1671 | WP_000845290.1 | formate--tetrahydrofolate ligase | - |
| EQH18_RS05155 (EQH18_05445) | mutY | 1025648..1026823 (+) | 1176 | WP_000886147.1 | A/G-specific adenine glycosylase | - |
| EQH18_RS05160 (EQH18_05450) | micA | 1026878..1027582 (+) | 705 | WP_000722076.1 | response regulator YycF | Regulator |
| EQH18_RS05165 (EQH18_05455) | micB | 1027575..1028924 (+) | 1350 | WP_000886210.1 | cell wall metabolism sensor histidine kinase VicK | Regulator |
| EQH18_RS05170 (EQH18_05460) | vicX | 1028926..1029735 (+) | 810 | WP_001289493.1 | MBL fold metallo-hydrolase | Regulator |
| EQH18_RS05175 (EQH18_05465) | relB | 1029826..1030068 (+) | 243 | WP_000208080.1 | type II toxin-antitoxin system RelB family antitoxin | - |
| EQH18_RS05180 (EQH18_05470) | - | 1030070..1030324 (+) | 255 | WP_001812387.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| EQH18_RS05185 (EQH18_05475) | - | 1030371..1031023 (+) | 653 | Protein_1043 | potassium channel family protein | - |
| EQH18_RS05190 (EQH18_05480) | - | 1031283..1032269 (-) | 987 | WP_000204727.1 | L-lactate dehydrogenase | - |
Sequence
Protein
Download Length: 234 a.a. Molecular weight: 26815.63 Da Isoelectric Point: 4.7164
>NTDB_id=338458 EQH18_RS05160 WP_000722076.1 1026878..1027582(+) (micA) [Streptococcus pneumoniae strain TVO_1901923]
MKKILIVDDEKPISDIIKFNMTKEGYEVVTAFNGREALEQFEAEQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSA
KDSEFDKVIGLELGADDYVTKPFSNRELQARVKALLRRSQPMPVDGQEADSKPQPIQIGDLEIVPDAYVAKKYGEELDLT
HREFELLYHLASHTGQVITREHLLETVWGYDYFGDVRTVDVTVRRLREKIEDTPSRPEYILTRRGVGYYMRNNA
MKKILIVDDEKPISDIIKFNMTKEGYEVVTAFNGREALEQFEAEQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSA
KDSEFDKVIGLELGADDYVTKPFSNRELQARVKALLRRSQPMPVDGQEADSKPQPIQIGDLEIVPDAYVAKKYGEELDLT
HREFELLYHLASHTGQVITREHLLETVWGYDYFGDVRTVDVTVRRLREKIEDTPSRPEYILTRRGVGYYMRNNA
Nucleotide
Download Length: 705 bp
>NTDB_id=338458 EQH18_RS05160 WP_000722076.1 1026878..1027582(+) (micA) [Streptococcus pneumoniae strain TVO_1901923]
ATGAAAAAAATACTAATTGTAGATGATGAGAAACCAATCTCGGATATTATCAAGTTTAATATGACCAAGGAAGGTTACGA
AGTTGTAACTGCTTTTAATGGTCGTGAAGCGCTAGAGCAATTTGAAGCAGAGCAACCAGATATTATTATTCTGGATTTGA
TGCTTCCAGAAATTGATGGTTTAGAAGTTGCTAAGACCATTCGTAAGACAAGCAGTGTGCCCATTCTTATGCTTTCAGCC
AAAGATAGTGAATTTGATAAGGTTATCGGTTTGGAACTTGGGGCAGATGACTATGTAACAAAACCCTTCTCCAATCGTGA
GTTGCAGGCGCGTGTTAAAGCTCTTCTGCGTCGTTCTCAACCTATGCCAGTAGATGGTCAGGAAGCAGATAGTAAACCTC
AACCTATCCAAATTGGGGATTTAGAAATTGTTCCAGACGCCTACGTGGCTAAAAAATATGGCGAAGAACTAGACTTAACC
CATCGTGAATTTGAGCTTTTGTATCATTTAGCATCGCATACAGGTCAAGTCATCACGCGCGAACACTTGCTTGAGACTGT
CTGGGGTTATGACTATTTTGGTGATGTCCGTACAGTTGATGTGACTGTACGACGTCTGCGTGAGAAGATTGAAGATACGC
CCAGCCGACCAGAGTATATCTTGACGCGCCGTGGTGTAGGGTATTACATGAGAAATAATGCTTGA
ATGAAAAAAATACTAATTGTAGATGATGAGAAACCAATCTCGGATATTATCAAGTTTAATATGACCAAGGAAGGTTACGA
AGTTGTAACTGCTTTTAATGGTCGTGAAGCGCTAGAGCAATTTGAAGCAGAGCAACCAGATATTATTATTCTGGATTTGA
TGCTTCCAGAAATTGATGGTTTAGAAGTTGCTAAGACCATTCGTAAGACAAGCAGTGTGCCCATTCTTATGCTTTCAGCC
AAAGATAGTGAATTTGATAAGGTTATCGGTTTGGAACTTGGGGCAGATGACTATGTAACAAAACCCTTCTCCAATCGTGA
GTTGCAGGCGCGTGTTAAAGCTCTTCTGCGTCGTTCTCAACCTATGCCAGTAGATGGTCAGGAAGCAGATAGTAAACCTC
AACCTATCCAAATTGGGGATTTAGAAATTGTTCCAGACGCCTACGTGGCTAAAAAATATGGCGAAGAACTAGACTTAACC
CATCGTGAATTTGAGCTTTTGTATCATTTAGCATCGCATACAGGTCAAGTCATCACGCGCGAACACTTGCTTGAGACTGT
CTGGGGTTATGACTATTTTGGTGATGTCCGTACAGTTGATGTGACTGTACGACGTCTGCGTGAGAAGATTGAAGATACGC
CCAGCCGACCAGAGTATATCTTGACGCGCCGTGGTGTAGGGTATTACATGAGAAATAATGCTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| micA | Streptococcus pneumoniae Cp1015 |
100 |
100 |
1 |
| vicR | Streptococcus mutans UA159 |
78.541 |
99.573 |
0.782 |
| covR | Streptococcus salivarius strain HSISS4 |
44.156 |
98.718 |
0.436 |
| covR | Lactococcus lactis subsp. lactis strain DGCC12653 |
43.478 |
98.291 |
0.427 |
| scnR | Streptococcus mutans UA159 |
38.197 |
99.573 |
0.38 |