Detailed information NTG0338456

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: EQH18_RS04590
• Genome accession: NZ_CP035262
• Coordinates: 912093..913046 (+)
• Length: 317 a.a.
• NCBI ID: WP_000495900.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901923
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 907093..918046

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH18_RS04565 (EQH18_04820)	rpmG	907836..907985 (+)	150	WP_001809104.1	50S ribosomal protein L33	-
EQH18_RS04570 (EQH18_04825)	secG	908025..908258 (+)	234	WP_000282517.1	preprotein translocase subunit SecG	-
EQH18_RS04575 (EQH18_04830)	rnr	908360..910714 (+)	2355	WP_000654903.1	ribonuclease R	-
EQH18_RS04580 (EQH18_04835)	smpB	910677..911144 (+)	468	WP_001051747.1	SsrA-binding protein SmpB	-
EQH18_RS04585 (EQH18_04840)	tehB	911160..912020 (+)	861	WP_000413763.1	SAM-dependent methyltransferase TehB	-
EQH18_RS04590 (EQH18_04845)	coiA	912093..913046 (+)	954	WP_000495900.1	competence protein CoiA	Machinery gene
EQH18_RS04595 (EQH18_04850)	pepF	913065..914867 (+)	1803	WP_000244118.1	oligoendopeptidase F	Regulator
EQH18_RS04600 (EQH18_04855)	-	914869..915582 (+)	714	WP_000230399.1	O-methyltransferase	-
EQH18_RS04605 (EQH18_04860)	prsA	915649..916590 (+)	942	WP_000727952.1	peptidylprolyl isomerase PrsA	-
EQH18_RS04610 (EQH18_04865)	-	916709..917050 (-)	342	Protein_929	transposase	-
EQH18_RS04615 (EQH18_04875)	-	917463..917558 (+)	96	Protein_930	IS630 family transposase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38243.86 Da
• Isoelectric Point: 8.9865

>NTDB_id=338456 EQH18_RS04590 WP_000495900.1 912093..913046(+) (coiA) [Streptococcus pneumoniae strain TVO_1901923]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQIHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=338456 EQH18_RS04590 WP_000495900.1 912093..913046(+) (coiA) [Streptococcus pneumoniae strain TVO_1901923]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGATCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACCTGGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGCTATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCAGCACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-263)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	99.685	100	0.997
coiA	Streptococcus pneumoniae Rx1	99.054	100	0.991
coiA	Streptococcus pneumoniae D39	99.054	100	0.991
coiA	Streptococcus pneumoniae R6	99.054	100	0.991
coiA	Streptococcus mitis NCTC 12261	88.959	100	0.89
coiA	Lactococcus lactis subsp. cremoris KW2	42.284	100	0.432