Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   F1D59_RS15515 Genome accession   NZ_CP043638
Coordinates   3490475..3491599 (+) Length   374 a.a.
NCBI ID   WP_030656397.1    Uniprot ID   A0ABQ3NT31
Organism   Streptomyces sp. INR7     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3485475..3496599
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F1D59_RS15500 (F1D59_15585) - 3485848..3486648 (+) 801 WP_372449497.1 hypothetical protein -
  F1D59_RS15505 (F1D59_15590) - 3486682..3488460 (-) 1779 WP_053613936.1 sigma-70 family RNA polymerase sigma factor -
  F1D59_RS15510 (F1D59_15595) radA/sms 3488612..3490030 (+) 1419 WP_030656395.1 DNA repair protein RadA Machinery gene
  F1D59_RS15515 (F1D59_15600) disA 3490475..3491599 (+) 1125 WP_030656397.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  F1D59_RS15520 (F1D59_15605) - 3491725..3492528 (-) 804 WP_053613935.1 hypothetical protein -
  F1D59_RS15525 (F1D59_15610) - 3492689..3493273 (+) 585 WP_107087796.1 phosphatase PAP2 family protein -
  F1D59_RS15530 (F1D59_15615) - 3493270..3494259 (+) 990 WP_258054021.1 A/G-specific adenine glycosylase -
  F1D59_RS15535 (F1D59_15620) - 3494568..3495134 (+) 567 WP_030027405.1 SigE family RNA polymerase sigma factor -
  F1D59_RS15540 (F1D59_15625) - 3495200..3495841 (+) 642 WP_063762034.1 hypothetical protein -
  F1D59_RS15545 (F1D59_15630) cseB 3495876..3496589 (+) 714 WP_030656407.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40393.36 Da        Isoelectric Point: 5.0260

>NTDB_id=338457 F1D59_RS15515 WP_030656397.1 3490475..3491599(+) (disA) [Streptomyces sp. INR7]
MAAKDGASAPGKSGASSKHDALMRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKAVEAMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDITKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVDEALAELDALTHPELLELPIVARALGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=338457 F1D59_RS15515 WP_030656397.1 3490475..3491599(+) (disA) [Streptomyces sp. INR7]
GTGGCAGCCAAGGACGGGGCATCAGCACCCGGGAAGTCCGGCGCGAGCTCCAAGCACGACGCGCTGATGCGCGCCTCGCT
GAGCGCGGTCGCACCTGGTCAGCCACTGCGCGACGGCCTTGAGCGGATCGTCCGGGGCAACACCGGCGGCCTCATCGTCC
TCGGCATGGACAAGGCCGTCGAGGCGATGTGCACGGGCGGCTTCGTCCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTCATCCTCGACAAGGACATCACCAAGATCCTGCGGGCCGGCGTACAGCTGGTGCC
GGACGCGTCCATCCCCACGGAGGAGACGGGCACGCGCCACCGCACGGCCGACCGCGTCTCCAAGCAGTGCGGCTTCCCGG
TGGTGTCGGTGTCGCAGTCGATGCGGCTGATCGCCCTGTACGTGGACGGGGAGCGGCGGGTCCTGGAGGAGTCCGGGGCG
ATCCTGTCGCGCGCGAACCAGGCGCTGGCCACGCTGGAGCGGTACAAGCTCCGCCTCGACGAGGTCGCCGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTCACGGTGCGCGACGTGACGGCGGTCGCGCAGCGGCTGGAAATGGTCCGCCGGATCG
CGACCGAGATCGCCGAGTACGTGGTCGAACTGGGCACGGACGGGCGACTGCTGTCCCTCCAGCTGGACGAGCTGACGGTG
GGGATCGAGCAGGAGCGGGAGCTGGTCATCCGGGACTACGTGCCCGAGCCGACGGCGAAGCGTTCCCGCACGGTGGACGA
GGCGCTGGCGGAGCTGGACGCGCTGACCCACCCGGAGCTGCTGGAACTGCCCATCGTGGCGCGGGCGCTGGGCTACACCG
GCTCGCCCGAGACGCTGGACTCGGCGGTGTCGCCCCGCGGCTACCGGCTGCTGGCGAAGGTCCCGAGGCTGCCGGGCGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTGCTCGCCGCGAGCGTCGACGACCTGCAGACGGTGGA
CGGCGTGGGCGAGGCGCGTGCGCGGAGCGTGCGCGAGGGGCTGTCGCGGCTGGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.983

96.524

0.444


Multiple sequence alignment