Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   EQH23_RS02820 Genome accession   NZ_CP035257
Coordinates   555195..555461 (+) Length   88 a.a.
NCBI ID   WP_001810535.1    Uniprot ID   A0A098Z1L6
Organism   Streptococcus pneumoniae strain TVO_1901928     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 550195..560461
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQH23_RS02800 (EQH23_02965) - 550345..550854 (+) 510 WP_000619941.1 N-acetyltransferase -
  EQH23_RS02805 (EQH23_02970) pheT 550931..553336 (+) 2406 WP_000961595.1 phenylalanine--tRNA ligase subunit beta -
  EQH23_RS02810 (EQH23_02975) - 553509..554510 (-) 1002 WP_000597995.1 endonuclease/exonuclease/phosphatase family protein -
  EQH23_RS02815 (EQH23_02980) - 554666..555069 (+) 404 Protein_562 helix-turn-helix domain-containing protein -
  EQH23_RS02820 (EQH23_02985) HI0659 555195..555461 (+) 267 WP_001810535.1 helix-turn-helix domain-containing protein Machinery gene
  EQH23_RS02825 (EQH23_02990) metE 555722..557971 (+) 2250 WP_000108213.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  EQH23_RS02830 (EQH23_02995) metF 558035..558901 (+) 867 WP_000089968.1 methylenetetrahydrofolate reductase [NAD(P)H] -

Sequence

Protein


Download         Length: 88 a.a.        Molecular weight: 9608.13 Da        Isoelectric Point: 4.4893

>NTDB_id=338060 EQH23_RS02820 WP_001810535.1 555195..555461(+) (HI0659) [Streptococcus pneumoniae strain TVO_1901928]
MEGCPSELFSKEEILESDMRVAIMSELIEARYEQGISQKKLEEVSGISQPVIARMETGKTSPQLDTVLKVLASLGKTLAV
VPLEQGKS

Nucleotide


Download         Length: 267 bp        

>NTDB_id=338060 EQH23_RS02820 WP_001810535.1 555195..555461(+) (HI0659) [Streptococcus pneumoniae strain TVO_1901928]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATCATGAGCGAGTT
GATTGAGGCTAGGTATGAACAAGGAATCAGTCAGAAAAAGCTGGAAGAAGTCAGTGGAATAAGCCAGCCTGTCATAGCTA
GGATGGAGACAGGAAAGACTAGTCCTCAGTTGGATACAGTCTTAAAAGTCCTAGCCAGTTTAGGAAAGACACTAGCAGTC
GTCCCACTTGAACAGGGAAAAAGTTGA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(29-79)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

59.74

87.5

0.523

Multiple sequence alignment