Detailed information
Bioinformatically predicted
Overview
| Name | ruvA | Type | Machinery gene |
| Locus tag | FTN78_RS11060 | Genome accession | NZ_CP043523 |
| Coordinates | 2138603..2139196 (+) | Length | 197 a.a. |
| NCBI ID | WP_003131995.1 | Uniprot ID | Q9CDL2 |
| Organism | Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 2133603..2144196
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FTN78_RS11050 (FTN78_chr2208) | - | 2135696..2136391 (+) | 696 | WP_010906384.1 | hypothetical protein | - |
| FTN78_RS11055 (FTN78_chr2209) | hexB | 2136520..2138490 (+) | 1971 | WP_031297070.1 | DNA mismatch repair endonuclease MutL | Machinery gene |
| FTN78_RS11060 (FTN78_chr2210) | ruvA | 2138603..2139196 (+) | 594 | WP_003131995.1 | Holliday junction branch migration protein RuvA | Machinery gene |
| FTN78_RS11065 (FTN78_chr2211) | ruvB | 2139322..2140323 (+) | 1002 | WP_003131994.1 | Holliday junction branch migration DNA helicase RuvB | Machinery gene |
| FTN78_RS11070 (FTN78_chr2212) | - | 2140460..2141344 (+) | 885 | WP_010906381.1 | XRE/MutR family transcriptional regulator | - |
| FTN78_RS11080 (FTN78_chr2215) | - | 2141921..2143138 (+) | 1218 | WP_150891148.1 | ABC transporter permease | - |
| FTN78_RS11085 (FTN78_chr2216) | - | 2143098..2144045 (-) | 948 | WP_003130410.1 | IS30 family transposase | - |
Sequence
Protein
Download Length: 197 a.a. Molecular weight: 21166.73 Da Isoelectric Point: 5.8174
>NTDB_id=338059 FTN78_RS11060 WP_003131995.1 2138603..2139196(+) (ruvA) [Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96]
MFEYLNGKLVKISPTNIVIDVAGIGYLISVANPYAWSALMNTEVKIYVHQVIREDAHSLYGFVNEAEKALFLRLISVSGI
GPKSALAIIAAADNEGLITAIDNSDIKYLTKFPGVGKKTAMQMVLDLAGKFDATGTVGISLLDAGPAGNLALEEAIEALQ
ALGYKATELKKIEKKLAQETGLTSEEYIKSALKLMMK
MFEYLNGKLVKISPTNIVIDVAGIGYLISVANPYAWSALMNTEVKIYVHQVIREDAHSLYGFVNEAEKALFLRLISVSGI
GPKSALAIIAAADNEGLITAIDNSDIKYLTKFPGVGKKTAMQMVLDLAGKFDATGTVGISLLDAGPAGNLALEEAIEALQ
ALGYKATELKKIEKKLAQETGLTSEEYIKSALKLMMK
Nucleotide
Download Length: 594 bp
>NTDB_id=338059 FTN78_RS11060 WP_003131995.1 2138603..2139196(+) (ruvA) [Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96]
ATGTTTGAATATCTTAATGGAAAATTAGTAAAAATTTCCCCAACAAATATTGTAATTGATGTAGCAGGAATTGGTTATCT
TATCAGTGTAGCTAACCCTTACGCTTGGTCTGCTTTGATGAACACAGAAGTAAAAATTTATGTTCATCAAGTCATTCGCG
AAGATGCCCACAGCCTCTATGGTTTTGTTAACGAGGCCGAAAAAGCTTTATTCTTACGTCTGATCAGCGTTTCTGGGATT
GGGCCAAAATCAGCTCTGGCCATCATTGCGGCGGCTGATAACGAAGGTTTAATCACTGCTATTGACAATAGTGATATCAA
GTATTTAACTAAATTTCCAGGAGTTGGTAAAAAAACAGCCATGCAGATGGTGCTTGATTTGGCTGGGAAATTTGATGCGA
CAGGAACTGTAGGTATTTCTCTTCTTGATGCTGGACCTGCTGGCAATCTTGCTTTGGAAGAAGCGATTGAAGCGCTGCAA
GCTTTGGGTTATAAAGCAACAGAATTGAAGAAAATTGAGAAAAAATTAGCTCAAGAAACAGGTCTGACCAGCGAAGAATA
TATCAAATCAGCCTTAAAACTTATGATGAAATAA
ATGTTTGAATATCTTAATGGAAAATTAGTAAAAATTTCCCCAACAAATATTGTAATTGATGTAGCAGGAATTGGTTATCT
TATCAGTGTAGCTAACCCTTACGCTTGGTCTGCTTTGATGAACACAGAAGTAAAAATTTATGTTCATCAAGTCATTCGCG
AAGATGCCCACAGCCTCTATGGTTTTGTTAACGAGGCCGAAAAAGCTTTATTCTTACGTCTGATCAGCGTTTCTGGGATT
GGGCCAAAATCAGCTCTGGCCATCATTGCGGCGGCTGATAACGAAGGTTTAATCACTGCTATTGACAATAGTGATATCAA
GTATTTAACTAAATTTCCAGGAGTTGGTAAAAAAACAGCCATGCAGATGGTGCTTGATTTGGCTGGGAAATTTGATGCGA
CAGGAACTGTAGGTATTTCTCTTCTTGATGCTGGACCTGCTGGCAATCTTGCTTTGGAAGAAGCGATTGAAGCGCTGCAA
GCTTTGGGTTATAAAGCAACAGAATTGAAGAAAATTGAGAAAAAATTAGCTCAAGAAACAGGTCTGACCAGCGAAGAATA
TATCAAATCAGCCTTAAAACTTATGATGAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ruvA | Streptococcus pneumoniae TIGR4 |
60.101 |
100 |
0.604 |
| ruvA | Streptococcus pneumoniae R6 |
60.101 |
100 |
0.604 |
| ruvA | Streptococcus pneumoniae D39 |
60.101 |
100 |
0.604 |
| ruvA | Bacillus subtilis subsp. subtilis str. 168 |
44.828 |
100 |
0.462 |