Detailed information
Bioinformatically predicted
Overview
| Name | comGE/cglE | Type | Machinery gene |
| Locus tag | EQH24_RS10205 | Genome accession | NZ_CP035256 |
| Coordinates | 1967233..1967535 (-) | Length | 100 a.a. |
| NCBI ID | WP_256901086.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain TVO_1901930 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1962233..1972535
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQH24_RS10175 (EQH24_10700) | rnpA | 1962912..1963283 (-) | 372 | WP_000739244.1 | ribonuclease P protein component | - |
| EQH24_RS11675 | - | 1963300..1963431 (-) | 132 | WP_000768904.1 | hypothetical protein | - |
| EQH24_RS10180 (EQH24_10705) | - | 1963432..1964622 (-) | 1191 | WP_000167753.1 | acetate kinase | - |
| EQH24_RS10185 (EQH24_10710) | comYH | 1964673..1965626 (-) | 954 | WP_000345126.1 | class I SAM-dependent methyltransferase | Machinery gene |
| EQH24_RS10190 (EQH24_10715) | - | 1965687..1966281 (-) | 595 | Protein_2013 | class I SAM-dependent methyltransferase | - |
| EQH24_RS10195 (EQH24_10720) | comGG/cglG | 1966418..1966831 (-) | 414 | WP_000265620.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| EQH24_RS10200 (EQH24_10725) | comGF/cglF | 1966809..1967270 (-) | 462 | WP_000250540.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| EQH24_RS10205 (EQH24_10730) | comGE/cglE | 1967233..1967535 (-) | 303 | WP_256901086.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| EQH24_RS10210 (EQH24_10735) | comGD/cglD | 1967498..1967902 (-) | 405 | WP_000588023.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| EQH24_RS10215 (EQH24_10740) | comGC/cglC | 1967895..1968161 (-) | 267 | WP_050129046.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| EQH24_RS10220 (EQH24_10745) | - | 1968163..1968420 (-) | 258 | WP_238101663.1 | hypothetical protein | - |
| EQH24_RS10225 (EQH24_10750) | - | 1968652..1969608 (-) | 957 | WP_000350480.1 | N-acetylmuramoyl-L-alanine amidase family protein | - |
| EQH24_RS10230 (EQH24_10755) | - | 1969612..1969944 (-) | 333 | WP_001186219.1 | phage holin | - |
| EQH24_RS10235 (EQH24_10760) | - | 1969948..1970247 (-) | 300 | WP_001811580.1 | hypothetical protein | - |
| EQH24_RS10240 (EQH24_10765) | - | 1970256..1970606 (-) | 351 | WP_000852245.1 | hypothetical protein | - |
| EQH24_RS10245 (EQH24_10770) | - | 1970609..1970812 (-) | 204 | WP_001091123.1 | hypothetical protein | - |
| EQH24_RS10250 (EQH24_10775) | - | 1970793..1970909 (-) | 117 | WP_001063632.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 11180.15 Da Isoelectric Point: 8.5847
>NTDB_id=338026 EQH24_RS10205 WP_256901086.1 1967233..1967535(-) (comGE/cglE) [Streptococcus pneumoniae strain TVO_1901930]
MEKLNALRKQKIRAVILLEAVVALAIFASIATLLLEQIQKNRQEEAKILQKEEVLRVAKMALQTGQNQVSINGVEIQVFS
SEKGLEVYHGSEQLLAIKEP
MEKLNALRKQKIRAVILLEAVVALAIFASIATLLLEQIQKNRQEEAKILQKEEVLRVAKMALQTGQNQVSINGVEIQVFS
SEKGLEVYHGSEQLLAIKEP
Nucleotide
Download Length: 303 bp
>NTDB_id=338026 EQH24_RS10205 WP_256901086.1 1967233..1967535(-) (comGE/cglE) [Streptococcus pneumoniae strain TVO_1901930]
ATGGAAAAATTAAACGCATTAAGGAAACAAAAAATTAGGGCAGTGATTTTACTGGAAGCAGTAGTCGCTCTAGCTATCTT
TGCCAGCATTGCGACCCTCCTTTTGGAACAAATTCAAAAAAATAGGCAAGAGGAAGCAAAAATCTTGCAAAAGGAAGAAG
TCTTGAGGGTAGCTAAGATGGCCCTGCAGACGGGGCAAAATCAGGTAAGCATCAACGGAGTTGAGATTCAGGTATTTTCT
AGTGAAAAAGGATTGGAGGTCTACCATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAA
ATGGAAAAATTAAACGCATTAAGGAAACAAAAAATTAGGGCAGTGATTTTACTGGAAGCAGTAGTCGCTCTAGCTATCTT
TGCCAGCATTGCGACCCTCCTTTTGGAACAAATTCAAAAAAATAGGCAAGAGGAAGCAAAAATCTTGCAAAAGGAAGAAG
TCTTGAGGGTAGCTAAGATGGCCCTGCAGACGGGGCAAAATCAGGTAAGCATCAACGGAGTTGAGATTCAGGTATTTTCT
AGTGAAAAAGGATTGGAGGTCTACCATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE/cglE | Streptococcus pneumoniae Rx1 |
99 |
100 |
0.99 |
| comGE/cglE | Streptococcus pneumoniae D39 |
99 |
100 |
0.99 |
| comGE/cglE | Streptococcus pneumoniae R6 |
99 |
100 |
0.99 |
| comGE/cglE | Streptococcus pneumoniae TIGR4 |
99 |
100 |
0.99 |
| comGE/cglE | Streptococcus mitis NCTC 12261 |
97 |
100 |
0.97 |
| comGE/cglE | Streptococcus mitis SK321 |
97 |
100 |
0.97 |
| comYE | Streptococcus mutans UA140 |
44.444 |
90 |
0.4 |
| comYE | Streptococcus mutans UA159 |
44.444 |
90 |
0.4 |