Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   EQH39_RS05885 Genome accession   NZ_CP035241
Coordinates   1186197..1186934 (-) Length   245 a.a.
NCBI ID   WP_000782677.1    Uniprot ID   A0A0U0DTC6
Organism   Streptococcus pneumoniae strain TVO_1901948     
Function   degradation of ComW (predicted from homology)   
Competence regulation

Genomic Context

Location: 1181197..1191934
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQH39_RS05865 (EQH39_06175) msrB 1182612..1183550 (-) 939 WP_000136403.1 peptide-methionine (R)-S-oxide reductase MsrB -
  EQH39_RS05870 - 1183617..1183814 (-) 198 WP_224757270.1 hypothetical protein -
  EQH39_RS05875 (EQH39_06185) thrB 1183890..1184759 (-) 870 WP_000692440.1 homoserine kinase -
  EQH39_RS05880 (EQH39_06190) - 1184761..1186047 (-) 1287 WP_000216382.1 homoserine dehydrogenase -
  EQH39_RS05885 (EQH39_06195) mecA 1186197..1186934 (-) 738 WP_000782677.1 adaptor protein MecA Regulator
  EQH39_RS05890 (EQH39_06200) - 1187076..1188110 (-) 1035 WP_000461502.1 hypothetical protein -
  EQH39_RS05895 (EQH39_06205) - 1188139..1189572 (-) 1434 WP_001813454.1 O-antigen polysaccharide polymerase Wzy family protein -
  EQH39_RS05900 (EQH39_06210) - 1189588..1190574 (-) 987 WP_000446977.1 glycosyltransferase family 2 protein -
  EQH39_RS05905 (EQH39_06215) - 1190576..1191679 (-) 1104 WP_000225903.1 glycosyltransferase -

Sequence

Protein


Download         Length: 245 a.a.        Molecular weight: 28395.21 Da        Isoelectric Point: 4.0236

>NTDB_id=337052 EQH39_RS05885 WP_000782677.1 1186197..1186934(-) (mecA) [Streptococcus pneumoniae strain TVO_1901948]
MKMKQISDTTLKITMSLEDLMDRGMEIADFLVPQEKTEEFFYAILDELEMPDSFLDTGMLSFRVTPKPDKVDVFVTKSKI
DQNLDFEDLSDLPDMEELAQMSPDEFIKTLEKSIADKTKDDIEAIQSLEQVEAKEEEQEQAEQEAESKKEPYIYYILSFA
KLADLVAFAKTVTFEMETSELYKMNERYYLTILVDIENHPSPYPAWLLARMREFAEDSDISRSVLQEYGQVLMSHDAVLN
LQKIG

Nucleotide


Download         Length: 738 bp        

>NTDB_id=337052 EQH39_RS05885 WP_000782677.1 1186197..1186934(-) (mecA) [Streptococcus pneumoniae strain TVO_1901948]
ATGAAAATGAAACAAATTAGTGATACAACTTTAAAAATCACGATGTCTTTAGAGGATTTGATGGATCGTGGAATGGAGAT
TGCTGACTTTCTCGTTCCTCAAGAAAAAACAGAAGAGTTCTTTTATGCTATCTTGGATGAGCTAGAGATGCCTGATAGCT
TTCTGGATACAGGCATGTTGAGCTTCCGTGTGACTCCAAAACCTGATAAGGTAGATGTCTTTGTGACCAAGTCAAAGATT
GACCAAAATCTAGATTTTGAAGACTTATCGGATTTGCCAGATATGGAAGAATTGGCTCAAATGTCTCCAGATGAATTTAT
CAAAACCCTGGAAAAAAGCATCGCAGACAAAACCAAGGATGATATCGAAGCCATTCAATCTCTTGAGCAAGTTGAAGCCA
AGGAAGAAGAGCAAGAGCAGGCTGAACAAGAAGCTGAGAGTAAGAAAGAACCTTACATCTACTACATCCTTTCTTTTGCT
AAGTTGGCTGACTTGGTAGCTTTTGCCAAGACAGTGACTTTTGAAATGGAAACTTCTGAACTCTACAAAATGAACGAGCG
CTATTATTTGACCATTTTAGTGGATATTGAAAATCATCCAAGCCCATATCCAGCTTGGCTGTTGGCCCGTATGCGCGAGT
TTGCAGAGGATAGTGATATCAGTCGCTCAGTCTTACAAGAGTATGGTCAAGTCTTGATGAGTCACGATGCAGTGCTCAAT
CTGCAAAAAATCGGCTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-239)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0U0DTC6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Streptococcus pneumoniae Rx1

99.184

100

0.992
  mecA Streptococcus pneumoniae D39

99.184

100

0.992
  mecA Streptococcus pneumoniae R6

99.184

100

0.992
  mecA Streptococcus pneumoniae TIGR4

98.776

100

0.988
  mecA Streptococcus thermophilus LMD-9

47.791

100

0.486
  mecA Streptococcus thermophilus LMG 18311

47.39

100

0.482
  mecA Streptococcus mutans UA159

48.163

100

0.482

Multiple sequence alignment