Detailed information NTG0336948

Bioinformatically predicted

Overview

• Name: letA
• Type: Regulator
• Locus tag: FZN32_RS16280
• Genome accession: NZ_CP043406
• Coordinates: 3344129..3344719 (+)
• Length: 196 a.a.
• NCBI ID: WP_000633675.1
• Uniprot ID: -
• Organism: Escherichia coli strain NMBU-W13E19
• Function: regulate competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3339129..3349719

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FZN32_RS16265 (FZN32_16715)	ilvN	3340372..3340662 (+)	291	WP_001181706.1	acetolactate synthase small subunit	-
FZN32_RS16270 (FZN32_16720)	-	3341740..3342222 (+)	483	WP_038428612.1	hypothetical protein	-
FZN32_RS16275 (FZN32_16725)	-	3342498..3343967 (+)	1470	WP_001309856.1	hypothetical protein	-
FZN32_RS16280 (FZN32_16730)	letA	3344129..3344719 (+)	591	WP_000633675.1	transcriptional regulator UhpA	Regulator
FZN32_RS16285 (FZN32_16735)	uhpB	3344719..3346221 (+)	1503	WP_001322651.1	signal transduction histidine-protein kinase/phosphatase UhpB	-
FZN32_RS16290 (FZN32_16740)	uhpC	3346231..3347550 (+)	1320	WP_001309854.1	MFS transporter family glucose-6-phosphate receptor UhpC	-
FZN32_RS16295 (FZN32_16745)	uhpT	3347688..3349079 (+)	1392	WP_000879194.1	hexose-6-phosphate:phosphate antiporter	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 20905.30 Da
• Isoelectric Point: 5.9982

>NTDB_id=336948 FZN32_RS16280 WP_000633675.1 3344129..3344719(+) (letA) [Escherichia coli strain NMBU-W13E19]
MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGLELLSQLPKGMATIMLSV
HDSPALVEQALNAGARGFLSKRCSPDELISAVHTVATGGCYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAA
ELGLSPKTVHVHRANLMEKLGVSNDVELARRMFDGW

Nucleotide

• Length: 591 bp

>NTDB_id=336948 FZN32_RS16280 WP_000633675.1 3344129..3344719(+) (letA) [Escherichia coli strain NMBU-W13E19]
ATGATCACCGTTGCCCTTATAGACGATCACCTTATCGTCCGCTCCGGCTTTGCGCAGTTGCTGGGGCTGGAACCTGATTT
GCAAGTAGTTGCCGAGTTTGGTTCGGGGCGCGAGGCGCTGGCGGGGCTGCCGGGGCGCGGTGTGCAGGTGTGTATTTGCG
ATATCTCCATGCCCGATATCTCCGGTCTGGAGCTGCTAAGCCAGCTGCCGAAAGGTATGGCGACGATTATGCTCTCCGTT
CATGACAGTCCGGCGCTGGTTGAGCAGGCGCTTAACGCGGGGGCGCGCGGCTTTCTCTCCAAACGCTGTAGCCCGGATGA
ACTGATTTCTGCGGTGCATACGGTTGCCACGGGCGGCTGTTATCTGACGCCGGATATTGCCATTAAACTGGCATCCGGTC
GCCAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGCGGTGAAAGAGATTGCCGCC
GAACTAGGTTTGTCGCCAAAAACTGTGCATGTACATCGTGCCAACCTGATGGAAAAACTGGGTGTCAGTAACGACGTTGA
ACTGGCGCGCCGCATGTTTGATGGCTGGTGA

Domains

Predicted by InterProScan.

• Response regulator receiver domain (Response_reg) (4-112)

• Bacterial regulatory proteins, luxR family (GerE) (136-191)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
letA	Legionella pneumophila str. Paris	38	100	0.388
letA	Legionella pneumophila strain ERS1305867	38	100	0.388
degU	Bacillus subtilis subsp. subtilis str. 168	33.184	100	0.378