Detailed information NTG0336832

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: EQH43_RS08640
• Genome accession: NZ_CP035237
• Coordinates: 1716918..1717985 (-)
• Length: 355 a.a.
• NCBI ID: WP_000159553.1
• Uniprot ID: A0A0T8CF10
• Organism: Streptococcus pneumoniae strain TVO_Taiwan19F-14
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1711918..1722985

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH43_RS08615 (EQH43_09055)	treR	1712005..1712715 (+)	711	WP_000760673.1	trehalose operon repressor	Regulator
EQH43_RS08620 (EQH43_09060)	-	1712872..1714015 (+)	1144	Protein_1725	transposase	-
EQH43_RS08625 (EQH43_09070)	-	1714182..1715528 (+)	1347	WP_041179004.1	IS1380-like element ISSpn5 family transposase	-
EQH43_RS08630 (EQH43_09075)	-	1715721..1715906 (+)	186	Protein_1727	transposase	-
EQH43_RS08635 (EQH43_09080)	amiF	1715981..1716907 (-)	927	WP_001291293.1	ATP-binding cassette domain-containing protein	Regulator
EQH43_RS08640 (EQH43_09085)	amiE	1716918..1717985 (-)	1068	WP_000159553.1	ABC transporter ATP-binding protein	Regulator
EQH43_RS08645 (EQH43_09090)	amiD	1717994..1718920 (-)	927	WP_000103702.1	oligopeptide ABC transporter permease OppC	Regulator
EQH43_RS08650 (EQH43_09095)	amiC	1718920..1720416 (-)	1497	WP_000759905.1	ABC transporter permease	Regulator
EQH43_RS08655 (EQH43_09100)	amiA3	1720483..1722462 (-)	1980	WP_000742234.1	peptide ABC transporter substrate-binding protein	Regulator

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 39437.04 Da
• Isoelectric Point: 4.8002

>NTDB_id=336832 EQH43_RS08640 WP_000159553.1 1716918..1717985(-) (amiE) [Streptococcus pneumoniae strain TVO_Taiwan19F-14]
MTKEKNVILTARDIVVEFDVRDKVLTAIRGVSLELVEGEVLALVGESGSGKSVLTKTFTGMLEENGRIAQGSIDYRGQDL
TALSSHKDWEQIRGAKIATIFQDPMTSLDPIKTIGSQITEVIVKHQGKTAKEAKELAIDYMNKVGIPDADRRFNEYPFQY
SGGMRQRIVIAIALACRPDVLICDEPTTALDVTIQAQIIDLLKSLQNEYHFTTIFITHDLGVVASIADKVAVMYAGEIVE
YGTVEEVFYDPCHPYTWSLLSSLPQLADDKGDLYSIPGTPPSLYTDLKGDAFALRSDYAMQIDFEQKAPQFSVSETHWAK
TWLLHEDAPKVEKPAVIANLHDKIREKMGFAHLAD

Nucleotide

• Length: 1068 bp

>NTDB_id=336832 EQH43_RS08640 WP_000159553.1 1716918..1717985(-) (amiE) [Streptococcus pneumoniae strain TVO_Taiwan19F-14]
ATGACAAAAGAAAAAAATGTAATTTTGACTGCTCGCGATATTGTCGTGGAATTTGACGTTCGTGACAAAGTATTGACAGC
CATTCGCGGCGTTTCCCTTGAACTAGTCGAAGGAGAAGTATTAGCCTTGGTAGGTGAGTCAGGATCAGGTAAATCTGTTT
TGACAAAGACCTTCACAGGTATGCTCGAAGAAAATGGTCGTATTGCCCAAGGTAGTATTGACTACCGTGGTCAGGACTTG
ACAGCTTTATCTTCTCACAAGGATTGGGAACAAATTCGTGGTGCTAAGATTGCGACTATCTTCCAGGACCCAATGACTAG
TTTGGACCCCATTAAAACAATTGGTAGTCAGATTACAGAAGTTATTGTAAAACACCAAGGAAAAACAGCTAAAGAAGCGA
AAGAATTGGCCATTGACTACATGAATAAGGTTGGCATTCCAGACGCAGATAGACGTTTTAATGAATACCCATTCCAATAT
TCTGGAGGAATGCGTCAACGTATCGTTATTGCGATTGCCCTTGCCTGCCGACCTGATGTCTTGATCTGTGATGAGCCAAC
AACTGCCTTGGATGTAACTATTCAAGCTCAGATTATTGATTTGCTAAAATCTTTACAAAACGAGTATCATTTCACAACAA
TCTTTATTACCCACGACCTTGGTGTGGTGGCAAGTATTGCGGATAAGGTAGCGGTTATGTATGCAGGAGAAATCGTTGAG
TATGGAACGGTTGAGGAAGTCTTCTATGACCCTTGCCATCCATATACATGGAGTCTCTTGTCTAGCTTGCCTCAGCTTGC
TGATGATAAAGGGGATCTTTACTCAATCCCAGGAACACCTCCGTCACTTTATACTGACCTGAAAGGGGATGCTTTTGCCT
TGCGTTCTGACTACGCAATGCAGATTGACTTCGAACAAAAAGCTCCTCAATTCTCAGTATCAGAGACACATTGGGCTAAA
ACTTGGCTTCTTCATGAGGATGCTCCAAAAGTAGAAAAACCAGCTGTGATTGCAAATCTCCATGATAAGATCCGTGAAAA
AATGGGATTTGCCCATCTGGCTGACTAG

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (29-187)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (239-301)

3D structure

• AlphaFold DB: A0A0T8CF10

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	88.451	100	0.885
amiE	Streptococcus thermophilus LMG 18311	86.761	100	0.868
amiE	Streptococcus thermophilus LMD-9	86.761	100	0.868
oppD	Streptococcus mutans UA159	54.545	99.155	0.541