Detailed information NTG0033525

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: SEQ_RS05940
• Genome accession: NC_012471
• Coordinates: 1199767..1200612 (-)
• Length: 281 a.a.
• NCBI ID: WP_012679593.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. equi 4047
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1194767..1205612

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SEQ_RS05925 (SEQ_1217)	-	1196038..1196751 (-)	714	WP_012679590.1	DUF3307 domain-containing protein	-
SEQ_RS05930 (SEQ_1218)	-	1196772..1197419 (-)	648	WP_012679591.1	SatD family protein	-
SEQ_RS05935 (SEQ_1219)	topA	1197534..1199666 (-)	2133	WP_012679592.1	type I DNA topoisomerase	-
SEQ_RS05940 (SEQ_1220)	dprA	1199767..1200612 (-)	846	WP_012679593.1	DNA-processing protein DprA	Machinery gene
SEQ_RS05945 (SEQ_1221)	-	1200858..1201640 (-)	783	WP_166525025.1	ribonuclease HII	-
SEQ_RS05950 (SEQ_1222)	ylqF	1201621..1202475 (-)	855	WP_012679595.1	ribosome biogenesis GTPase YlqF	-
SEQ_RS05955 (SEQ_1223)	-	1203068..1203700 (-)	633	Protein_1137	ATP-binding cassette domain-containing protein	-
SEQ_RS05960 (SEQ_1225)	-	1203702..1204469 (-)	768	WP_042357449.1	DUF1430 domain-containing protein	-
SEQ_RS11740	-	1204751..1204885 (-)	135	Protein_1139	immunity protein	-

Sequence

Protein

• Length: 281 a.a.
• Molecular weight: 31348.27 Da
• Isoelectric Point: 8.8540

>NTDB_id=33525 SEQ_RS05940 WP_012679593.1 1199767..1200612(-) (dprA) [Streptococcus equi subsp. equi 4047]
MNNFELYKLKKAGLTNLNILNLIDYQQRNNKSLSLRDMAVVSCCKNPVLFIETYKQLNVALLKKEFNQFPSLSILDKQYP
LALREIYNPPVLLFYQGDLSLLEKPKLAVVGSRESSEIGTRSVYKIIKELKNHFVIVSGLARGIDTSAHLACLKAGGQTI
AVIGTGLDRYYPKENHQLQEFLSQRHLVLSEYGAGEAALSYHFPERNRIIAGLSRGVLVVEAKQRSGSLITCQLAMEEGR
DIFVVPDNILNGTSAGCLKLIKDGASCVTHGRDILSEYHYS

Nucleotide

• Length: 846 bp

>NTDB_id=33525 SEQ_RS05940 WP_012679593.1 1199767..1200612(-) (dprA) [Streptococcus equi subsp. equi 4047]
ATGAATAATTTTGAACTTTATAAATTAAAAAAGGCTGGGCTAACTAATTTAAATATTCTTAACCTGATTGACTACCAGCA
GCGTAATAACAAGTCTCTATCCCTTAGAGATATGGCAGTGGTTTCTTGCTGCAAAAATCCAGTTTTATTTATTGAGACCT
ACAAGCAATTAAATGTCGCCTTGTTAAAAAAGGAATTCAACCAGTTTCCGAGCTTATCTATCCTAGATAAGCAATACCCA
TTGGCCCTGAGGGAAATCTATAATCCTCCTGTTTTACTCTTTTATCAAGGTGATTTAAGCCTGTTAGAAAAGCCTAAGCT
GGCAGTCGTTGGCTCTAGAGAATCCAGTGAAATTGGGACGCGGTCTGTTTACAAAATCATCAAAGAGCTTAAGAATCACT
TTGTCATTGTCAGCGGGCTTGCTAGAGGTATTGATACCAGTGCTCATCTCGCTTGCTTGAAAGCAGGTGGGCAAACCATA
GCTGTTATCGGGACTGGCCTAGATCGCTACTATCCAAAGGAAAATCACCAGCTACAGGAGTTTTTATCTCAGCGTCATCT
CGTGCTCAGTGAATATGGGGCTGGAGAGGCCGCCTTGTCTTATCATTTCCCTGAAAGAAACCGTATTATCGCAGGTCTTA
GTCGAGGTGTCCTTGTTGTTGAGGCTAAGCAGCGCTCTGGCTCTTTGATTACCTGTCAGCTAGCTATGGAAGAGGGACGT
GATATTTTTGTCGTACCTGACAATATTCTTAATGGGACATCGGCGGGCTGTTTGAAGCTGATCAAAGATGGTGCCAGCTG
TGTCACTCATGGCAGAGACATTCTTTCAGAATACCACTATTCTTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-61)

• DNA recombination-mediator protein A (DNA_processg_A) (71-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	68.929	99.644	0.687
dprA/cilB/dalA	Streptococcus mitis SK321	59.286	99.644	0.591
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	58.929	99.644	0.587
dprA/cilB/dalA	Streptococcus pneumoniae D39	58.929	99.644	0.587
dprA/cilB/dalA	Streptococcus pneumoniae R6	58.929	99.644	0.587
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	58.929	99.644	0.587
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	58.571	99.644	0.584
dprA	Lactococcus lactis subsp. cremoris KW2	56.94	100	0.569
dprA	Bacillus subtilis subsp. subtilis str. 168	42.4	88.968	0.377