Detailed information NTG0033450

Bioinformatically predicted

Overview

• Name: amiC
• Type: Regulator
• Locus tag: SZO_RS01575
• Genome accession: NC_012470
• Coordinates: 331766..333265 (+)
• Length: 499 a.a.
• NCBI ID: WP_012677389.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 326766..338265

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SZO_RS01565 (SZO_02760)	pbp3	328180..329418 (-)	1239	WP_012677387.1	D-alanyl-D-alanine carboxypeptidase PBP3	-
SZO_RS01570 (SZO_02770)	amiA3	329726..331702 (+)	1977	WP_041790312.1	peptide ABC transporter substrate-binding protein	Regulator
SZO_RS01575 (SZO_02780)	amiC	331766..333265 (+)	1500	WP_012677389.1	ABC transporter permease	Regulator
SZO_RS01580 (SZO_02790)	amiD	333265..334191 (+)	927	WP_012677390.1	oligopeptide ABC transporter permease OppC	Regulator
SZO_RS01585 (SZO_02800)	amiE	334200..335270 (+)	1071	WP_012516279.1	ABC transporter ATP-binding protein	Regulator
SZO_RS01590 (SZO_02810)	amiF	335263..336186 (+)	924	WP_012516278.1	ATP-binding cassette domain-containing protein	Regulator
SZO_RS01595 (SZO_02820)	-	336584..337747 (-)	1164	WP_012677391.1	IS30-like element ISSeq6 family transposase	-

Sequence

Protein

• Length: 499 a.a.
• Molecular weight: 55650.10 Da
• Isoelectric Point: 10.1102

>NTDB_id=33450 SZO_RS01575 WP_012677389.1 331766..333265(+) (amiC) [Streptococcus equi subsp. zooepidemicus]
MKKYIFERILRSLVSILLVTALTYTIVFTLVPKSLIFKQDPNYNKMVTTPDKKTNYLNTVFENMGYISYYSSKELQNKAS
KLDPSVTTAPTKANEKIYQKYIASIGNGWKLGRFTESKGFYAVREIPIYERVWNFFSHLVVIDHPWKIKDPKNPNLERYV
RPEIDPAVGPALVGSGTKHKYLIYFNKQFPFIHQNIITFDLGVSYPTYANIPVVQVITQGQGRTLQKEVTFPTGKTKLSS
IDIYSRTYKTPSSLDSKDIANFGKGDAYTNTQNNYAEPSMIANSFKIGIVGVLLSYLFGLPIGMLMAYYKNGWFDRFSTA
ATTFMLALPSIALIYIVRFVGSYLGLPDTFPLLGAGDVRSYVLPALILGILGTPSTVVWFRRYIVDLQGSDFVRFARAKG
LSEFEISKNHLFKQAMVPIVNGIPQAIVGTIAGATLTETVFAFPGMGKMLIDSIKAANNSMVVGLVFIFAVLSILALLVG
DILMTILDPRIKLSGKGGK

Nucleotide

• Length: 1500 bp

>NTDB_id=33450 SZO_RS01575 WP_012677389.1 331766..333265(+) (amiC) [Streptococcus equi subsp. zooepidemicus]
ATGAAAAAATACATATTTGAACGCATATTGAGGTCGCTTGTTTCAATCCTGCTGGTAACCGCACTAACCTATACTATTGT
CTTTACCTTAGTGCCAAAAAGCTTGATTTTTAAGCAAGACCCTAATTACAATAAGATGGTGACAACACCTGATAAGAAAA
CCAATTATCTAAATACTGTTTTTGAAAATATGGGCTATATTTCCTATTACAGCAGTAAAGAACTGCAGAATAAGGCTTCA
AAGCTTGATCCTTCTGTAACAACTGCACCAACCAAGGCCAATGAAAAAATATATCAAAAATATATTGCTTCTATCGGTAA
TGGTTGGAAGCTTGGGCGCTTTACAGAAAGTAAGGGATTTTATGCCGTTAGAGAGATTCCAATCTATGAGCGCGTGTGGA
ATTTCTTTAGCCATTTGGTTGTGATTGATCACCCATGGAAAATCAAGGATCCAAAAAATCCAAATCTAGAGCGTTATGTG
CGACCAGAAATTGACCCCGCTGTTGGTCCGGCCTTAGTTGGCTCTGGTACTAAGCACAAATACTTGATTTACTTCAACAA
GCAATTCCCATTTATCCATCAAAATATCATAACCTTTGATTTGGGAGTGTCCTATCCAACCTATGCCAACATTCCGGTTG
TTCAGGTTATCACTCAAGGACAAGGAAGAACACTTCAAAAGGAGGTCACCTTCCCAACAGGAAAGACAAAATTATCATCA
ATTGATATTTACTCTAGGACTTATAAAACTCCAAGCTCTTTAGATAGCAAGGATATTGCCAATTTTGGTAAGGGTGATGC
TTATACTAATACACAAAATAACTATGCAGAACCATCTATGATTGCAAATTCCTTTAAGATTGGTATTGTCGGTGTCTTGC
TGTCCTATCTTTTTGGTTTGCCAATTGGTATGCTGATGGCTTATTATAAGAATGGCTGGTTTGACCGCTTTTCAACGGCT
GCCACAACCTTTATGTTAGCCCTGCCAAGCATTGCGCTTATCTATATTGTTCGATTTGTCGGTTCTTATTTGGGCTTGCC
AGATACCTTTCCGCTGCTAGGAGCAGGAGATGTTAGGTCTTATGTGCTGCCTGCTCTTATATTAGGAATTCTTGGTACAC
CAAGTACAGTAGTTTGGTTCCGACGCTATATTGTGGACTTGCAAGGCAGTGATTTTGTTCGCTTTGCACGAGCAAAGGGG
CTTTCAGAATTTGAGATTTCAAAAAATCATCTCTTTAAGCAGGCTATGGTGCCTATTGTTAACGGTATTCCACAAGCCAT
TGTCGGAACAATTGCCGGTGCAACCTTGACAGAGACCGTCTTTGCTTTCCCAGGAATGGGTAAAATGCTGATTGATTCCA
TAAAAGCTGCTAATAACTCTATGGTTGTTGGTCTTGTCTTTATTTTTGCTGTTTTATCAATATTAGCCTTGCTAGTAGGT
GATATTCTTATGACGATTTTAGATCCACGTATTAAATTATCAGGTAAAGGAGGTAAGTAA

Domains

Predicted by InterproScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (299-492)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiC	Streptococcus salivarius strain HSISS4	62.325	100	0.623
amiC	Streptococcus thermophilus LMG 18311	62.325	100	0.623
amiC	Streptococcus thermophilus LMD-9	62.124	100	0.621