Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   BSN5_RS11250 Genome accession   NC_014976
Coordinates   2149970..2150764 (-) Length   264 a.a.
NCBI ID   WP_003242676.1    Uniprot ID   C0SP91
Organism   Bacillus subtilis BSn5     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2144970..2155764
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSN5_RS11220 (BSn5_11180) - 2145101..2145655 (-) 555 WP_015715050.1 SdpA family antimicrobial peptide system protein -
  BSN5_RS11225 (BSn5_11185) - 2145839..2146474 (-) 636 WP_041520538.1 SdpI family protein -
  BSN5_RS11230 (BSn5_11190) - 2146474..2146758 (-) 285 WP_015715052.1 autorepressor SdpR family transcription factor -
  BSN5_RS11235 (BSn5_11195) rocR 2146989..2148374 (+) 1386 WP_003244510.1 arginine utilization regulatory protein RocR -
  BSN5_RS21570 - 2148356..2148508 (-) 153 Protein_2213 ATP-binding protein -
  BSN5_RS11240 (BSn5_11200) - 2148536..2148666 (-) 131 Protein_2214 hypothetical protein -
  BSN5_RS11245 (BSn5_11205) htrA 2148686..2149888 (-) 1203 WP_009969578.1 serine protease HtrC Regulator
  BSN5_RS11250 (BSn5_11210) vicX 2149970..2150764 (-) 795 WP_003242676.1 MBL fold metallo-hydrolase Regulator
  BSN5_RS11255 (BSn5_11215) walI 2150786..2151628 (-) 843 WP_003244037.1 WalRK two-component regulatory system regulator WalI -
  BSN5_RS11260 (BSn5_11220) walH 2151615..2152982 (-) 1368 WP_003242498.1 WalRK two-component regulatory system regulator WalH -
  BSN5_RS11265 (BSn5_11225) walK 2152972..2154807 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  BSN5_RS11270 (BSn5_11230) walR 2154815..2155522 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29256.25 Da        Isoelectric Point: 5.8036

>NTDB_id=33452 BSN5_RS11250 WP_003242676.1 2149970..2150764(-) (vicX) [Bacillus subtilis BSn5]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYSGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=33452 BSN5_RS11250 WP_003242676.1 2149970..2150764(-) (vicX) [Bacillus subtilis BSn5]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCAATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTTTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC
ATTATAGCGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTATTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C0SP91

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53

Multiple sequence alignment