Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   SZO_RS01520 Genome accession   NC_012470
Coordinates   317883..318647 (+) Length   254 a.a.
NCBI ID   WP_012677379.1    Uniprot ID   A0AAW3GKI0
Organism   Streptococcus equi subsp. zooepidemicus     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 312883..323647
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SZO_RS10160 (SZO_02630) - 313869..313985 (-) 117 WP_012677375.1 putative metal homeostasis protein -
  SZO_RS01505 (SZO_02640) - 314308..315048 (-) 741 WP_012677376.1 amino acid ABC transporter ATP-binding protein -
  SZO_RS01510 (SZO_02650) - 315041..316609 (-) 1569 WP_012677377.1 ABC transporter substrate-binding protein/permease -
  SZO_RS01515 (SZO_02660) - 316924..317763 (+) 840 WP_012677378.1 undecaprenyl-diphosphate phosphatase -
  SZO_RS01520 (SZO_02670) mecA 317883..318647 (+) 765 WP_012677379.1 adaptor protein MecA Regulator
  SZO_RS01525 (SZO_02680) - 318654..319811 (+) 1158 WP_012677380.1 glycosyltransferase family 4 protein -
  SZO_RS01530 (SZO_02690) sufC 319938..320708 (+) 771 WP_012516290.1 Fe-S cluster assembly ATPase SufC -
  SZO_RS01535 (SZO_02700) sufD 320799..322061 (+) 1263 WP_012677382.1 Fe-S cluster assembly protein SufD -
  SZO_RS01540 (SZO_02710) - 322088..323314 (+) 1227 WP_012677383.1 cysteine desulfurase -

Sequence

Protein


Download         Length: 254 a.a.        Molecular weight: 29250.07 Da        Isoelectric Point: 4.2228

>NTDB_id=33448 SZO_RS01520 WP_012677379.1 317883..318647(+) (mecA) [Streptococcus equi subsp. zooepidemicus]
MEMKQISETTLKITISMDDLEERGMELKDFLIPQEKTEEFFYAVMDELDLPDNFKDSGMLSFRVTPRKDRLDVFVTKSDL
NKDLNFEDLADLGDISQMTPEDFFRSLEQSMREKGDVNAHEKLEKIEEIMEDVVDATLAEQADSKEAAELDEPTEPLDYV
HYVLDFASVRDAVCFAKVIDFPIEASELYKGPRHYHMTILLDVQNKPAYFANVMYARLIEHASPGTKTRAYLQEHGCQLI
FDGAVEELQKIRLG

Nucleotide


Download         Length: 765 bp        

>NTDB_id=33448 SZO_RS01520 WP_012677379.1 317883..318647(+) (mecA) [Streptococcus equi subsp. zooepidemicus]
ATGGAAATGAAACAAATTAGCGAGACAACGCTAAAAATAACAATTAGTATGGACGATTTAGAAGAAAGGGGTATGGAACT
CAAGGACTTCTTGATCCCTCAAGAAAAGACAGAGGAGTTCTTTTATGCTGTTATGGACGAGTTGGACCTTCCGGACAATT
TTAAGGACAGTGGTATGCTTAGCTTTCGAGTGACTCCAAGAAAGGATCGCTTAGATGTTTTTGTGACCAAATCAGACCTC
AATAAGGACCTTAATTTTGAGGATTTGGCAGACCTAGGTGATATTTCTCAAATGACTCCAGAGGATTTTTTCAGGAGCTT
GGAGCAGTCTATGCGTGAAAAGGGTGATGTCAATGCTCATGAAAAGCTTGAAAAAATCGAGGAGATCATGGAGGACGTGG
TTGATGCTACCTTGGCTGAGCAAGCAGATAGTAAGGAAGCTGCTGAGCTTGATGAGCCGACAGAGCCACTTGATTACGTT
CACTATGTTCTTGATTTTGCTTCTGTTCGAGACGCTGTTTGCTTTGCTAAGGTGATTGATTTTCCGATCGAGGCTTCTGA
ATTGTATAAGGGTCCTCGCCATTATCACATGACGATTTTACTTGATGTGCAAAACAAGCCTGCCTACTTTGCCAATGTGA
TGTATGCCAGATTGATTGAGCATGCTAGTCCTGGTACAAAAACAAGAGCTTATTTGCAGGAGCATGGTTGTCAGCTCATT
TTTGATGGTGCTGTTGAGGAGCTGCAAAAAATCAGGTTGGGGTAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-248)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Streptococcus mutans UA159

63.745

98.819

0.63
  mecA Streptococcus thermophilus LMD-9

57.255

100

0.575
  mecA Streptococcus thermophilus LMG 18311

56.471

100

0.567
  mecA Streptococcus pneumoniae TIGR4

48.031

100

0.48
  mecA Streptococcus pneumoniae Rx1

47.638

100

0.476
  mecA Streptococcus pneumoniae D39

47.638

100

0.476
  mecA Streptococcus pneumoniae R6

47.638

100

0.476

Multiple sequence alignment