Detailed information NTG0334178

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: EP560_RS16310
• Genome accession: NZ_CP035045
• Coordinates: 3370738..3371220 (-)
• Length: 160 a.a.
• NCBI ID: WP_001046417.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain ABUH793
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3365738..3376220

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EP560_RS16275 (EP560_16275)	-	3365846..3366880 (+)	1035	WP_001189451.1	lipase secretion chaperone	-
EP560_RS16280 (EP560_16280)	-	3366995..3367936 (+)	942	WP_085946156.1	lipase family alpha/beta hydrolase	-
EP560_RS16285 (EP560_16285)	rplS	3367988..3368356 (-)	369	WP_000014562.1	50S ribosomal protein L19	-
EP560_RS16290 (EP560_16290)	trmD	3368564..3369304 (-)	741	WP_000464599.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
EP560_RS16295 (EP560_16295)	rimM	3369350..3369898 (-)	549	WP_000189236.1	ribosome maturation factor RimM	-
EP560_RS16300 (EP560_16300)	rpsP	3369918..3370169 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
EP560_RS16305 (EP560_16305)	pilE	3370316..3370741 (-)	426	WP_000788342.1	type IV pilin protein	Machinery gene
EP560_RS16310 (EP560_16310)	pilY2	3370738..3371220 (-)	483	WP_001046417.1	type IV pilin protein	Machinery gene
EP560_RS16315 (EP560_16315)	pilY1	3371233..3375087 (-)	3855	WP_000768966.1	PilC/PilY family type IV pilus protein	Machinery gene
EP560_RS16320 (EP560_16320)	pilX	3375099..3375917 (-)	819	WP_000149374.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17516.77 Da
• Isoelectric Point: 8.4817

>NTDB_id=334178 EP560_RS16310 WP_001046417.1 3370738..3371220(-) (pilY2) [Acinetobacter baumannii strain ABUH793]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ

Nucleotide

• Length: 483 bp

>NTDB_id=334178 EP560_RS16310 WP_001046417.1 3370738..3371220(-) (pilY2) [Acinetobacter baumannii strain ABUH793]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTGGAACAGCATAAATCAAGAAATTTTACTTATAGGGGGTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGACAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-115)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	98.125	100	0.981
comE	Acinetobacter baylyi ADP1	41.279	100	0.444