Detailed information NTG0334116

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: EP550_RS01705
• Genome accession: NZ_CP035043
• Coordinates: 362768..363250 (+)
• Length: 160 a.a.
• NCBI ID: WP_001046417.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain ABUH796
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 357768..368250

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EP550_RS01695 (EP550_01695)	pilX	358071..358889 (+)	819	WP_000149374.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene
EP550_RS01700 (EP550_01700)	pilY1	358901..362755 (+)	3855	WP_000768966.1	PilC/PilY family type IV pilus protein	Machinery gene
EP550_RS01705 (EP550_01705)	pilY2	362768..363250 (+)	483	WP_001046417.1	type IV pilin protein	Machinery gene
EP550_RS01710 (EP550_01710)	pilE	363247..363672 (+)	426	WP_000788342.1	type IV pilin protein	Machinery gene
EP550_RS01715 (EP550_01715)	rpsP	363819..364070 (+)	252	WP_000260334.1	30S ribosomal protein S16	-
EP550_RS01720 (EP550_01720)	rimM	364090..364638 (+)	549	WP_000189236.1	ribosome maturation factor RimM	-
EP550_RS01725 (EP550_01725)	trmD	364684..365424 (+)	741	WP_000464599.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
EP550_RS01730 (EP550_01730)	rplS	365632..366000 (+)	369	WP_000014562.1	50S ribosomal protein L19	-
EP550_RS01735 (EP550_01735)	-	366052..366993 (-)	942	WP_085946156.1	lipase family alpha/beta hydrolase	-
EP550_RS01740 (EP550_01740)	-	367108..368142 (-)	1035	WP_001189451.1	lipase secretion chaperone	-

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17516.77 Da
• Isoelectric Point: 8.4817

>NTDB_id=334116 EP550_RS01705 WP_001046417.1 362768..363250(+) (pilY2) [Acinetobacter baumannii strain ABUH796]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ

Nucleotide

• Length: 483 bp

>NTDB_id=334116 EP550_RS01705 WP_001046417.1 362768..363250(+) (pilY2) [Acinetobacter baumannii strain ABUH796]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTGGAACAGCATAAATCAAGAAATTTTACTTATAGGGGGTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGACAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-115)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	98.125	100	0.981
comE	Acinetobacter baylyi ADP1	41.279	100	0.444