Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | EP550_RS01710 | Genome accession | NZ_CP035043 |
| Coordinates | 363247..363672 (+) | Length | 141 a.a. |
| NCBI ID | WP_000788342.1 | Uniprot ID | N9K1U0 |
| Organism | Acinetobacter baumannii strain ABUH796 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 358247..368672
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EP550_RS01700 (EP550_01700) | pilY1 | 358901..362755 (+) | 3855 | WP_000768966.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| EP550_RS01705 (EP550_01705) | pilY2 | 362768..363250 (+) | 483 | WP_001046417.1 | type IV pilin protein | Machinery gene |
| EP550_RS01710 (EP550_01710) | pilE | 363247..363672 (+) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| EP550_RS01715 (EP550_01715) | rpsP | 363819..364070 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| EP550_RS01720 (EP550_01720) | rimM | 364090..364638 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| EP550_RS01725 (EP550_01725) | trmD | 364684..365424 (+) | 741 | WP_000464599.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| EP550_RS01730 (EP550_01730) | rplS | 365632..366000 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| EP550_RS01735 (EP550_01735) | - | 366052..366993 (-) | 942 | WP_085946156.1 | lipase family alpha/beta hydrolase | - |
| EP550_RS01740 (EP550_01740) | - | 367108..368142 (-) | 1035 | WP_001189451.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15214.45 Da Isoelectric Point: 7.8464
>NTDB_id=334117 EP550_RS01710 WP_000788342.1 363247..363672(+) (pilE) [Acinetobacter baumannii strain ABUH796]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=334117 EP550_RS01710 WP_000788342.1 363247..363672(+) (pilE) [Acinetobacter baumannii strain ABUH796]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
92.199 |
100 |
0.922 |
| comF | Acinetobacter baylyi ADP1 |
52.143 |
99.291 |
0.518 |