Detailed information NTG0333436

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: FWK44_RS08115
• Genome accession: NZ_CP042984
• Coordinates: 1726576..1727682 (-)
• Length: 368 a.a.
• NCBI ID: WP_132994706.1
• Uniprot ID: -
• Organism: Histophilus somni strain UOC-KLM-ATR-03
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1721576..1732682

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FWK44_RS08095 (FWK44_08095)	rpsT	1722310..1722573 (-)	264	WP_011608572.1	30S ribosomal protein S20	-
FWK44_RS08100 (FWK44_08100)	murJ	1722851..1724422 (+)	1572	WP_132994704.1	murein biosynthesis integral membrane protein MurJ	-
FWK44_RS08105 (FWK44_08105)	pilA	1724584..1725927 (-)	1344	WP_132994705.1	signal recognition particle-docking protein FtsY	Machinery gene
FWK44_RS08110 (FWK44_08110)	rsmD	1725991..1726593 (+)	603	WP_012341564.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
FWK44_RS08115 (FWK44_08115)	dprA	1726576..1727682 (-)	1107	WP_132994706.1	DNA-processing protein DprA	Machinery gene
FWK44_RS08120 (FWK44_08120)	tsaD	1727913..1728941 (+)	1029	WP_132994707.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
FWK44_RS08125 (FWK44_08125)	-	1729003..1729590 (+)	588	WP_011608566.1	thymidine kinase	-
FWK44_RS08130 (FWK44_08130)	-	1729751..1730422 (+)	672	WP_132994708.1	trimeric intracellular cation channel family protein	-
FWK44_RS08135 (FWK44_08135)	proA	1730432..1731688 (+)	1257	WP_132994709.1	glutamate-5-semialdehyde dehydrogenase	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 41535.78 Da
• Isoelectric Point: 6.5011

>NTDB_id=333436 FWK44_RS08115 WP_132994706.1 1726576..1727682(-) (dprA) [Histophilus somni strain UOC-KLM-ATR-03]
MDKRNELLLRLLQVPKLGASGITQLLSHIDLKTLEDYDDVAFHYLGWKPEQVNRWLYPDLRYIEPALFWASKKGHYLMNF
YQENYPYLLKQTIGAPPLLFIKGNPEILAQQQVAIVGSRHCSHYGEYWAKYFATELFLAGFVITSGLALGIDGFCHQAVV
DIQGQTIGVLGGGLEELYPKQHKKLAQQMLDYGGALVSEFLPHQPPKPQHFPQRNRIISGLSKGVLVVEATEKSGSLITA
RYALEQNREVFALPGQIQNEYSQGCHRLIKDGALLVENVADIVENLSPFMHYERQLTAKQIETQFPPAYKLPASPTYPEL
YAHIGYTPVGLDELSNKSGLSVDTLLIQLLELELQDLVIAEKGLYRRT

Nucleotide

• Length: 1107 bp

>NTDB_id=333436 FWK44_RS08115 WP_132994706.1 1726576..1727682(-) (dprA) [Histophilus somni strain UOC-KLM-ATR-03]
ATGGATAAACGGAATGAGTTGTTACTGCGTTTGTTACAAGTGCCGAAGTTGGGAGCGTCCGGAATAACTCAACTTTTATC
ACACATCGATTTAAAAACATTAGAGGATTATGATGATGTTGCGTTTCATTATTTAGGCTGGAAACCTGAACAGGTAAATA
GATGGTTGTATCCGGATCTTAGATATATTGAACCTGCATTATTTTGGGCAAGCAAAAAGGGACATTATTTGATGAATTTC
TATCAAGAGAATTACCCTTATTTATTAAAGCAAACCATAGGTGCTCCCCCTTTGTTATTTATCAAAGGCAATCCGGAAAT
ACTTGCTCAACAACAAGTCGCTATTGTAGGAAGCCGTCATTGCTCACATTATGGCGAGTATTGGGCAAAGTATTTTGCAA
CGGAATTGTTCCTTGCCGGTTTTGTTATTACCAGTGGACTGGCTTTAGGGATAGACGGTTTTTGTCATCAGGCTGTTGTG
GATATTCAAGGACAAACTATCGGGGTATTAGGGGGAGGTTTGGAAGAGTTGTATCCCAAACAACATAAAAAATTAGCACA
ACAAATGCTAGATTATGGCGGTGCGTTAGTGTCAGAATTTTTACCTCATCAGCCTCCCAAACCACAACATTTTCCTCAAC
GTAATCGCATTATTAGCGGACTTTCTAAAGGTGTTTTAGTGGTTGAGGCAACAGAAAAAAGCGGTTCACTCATTACTGCA
CGTTATGCTTTAGAACAAAATAGAGAAGTTTTTGCACTTCCGGGGCAAATTCAAAATGAGTATAGTCAAGGGTGTCATAG
ATTAATAAAAGACGGTGCATTGTTAGTAGAGAATGTTGCAGATATTGTAGAAAATTTATCGCCTTTTATGCATTATGAAC
GTCAACTAACAGCAAAACAGATAGAAACGCAATTTCCGCCGGCTTATAAGTTACCTGCTTCACCGACTTATCCTGAACTC
TATGCCCATATTGGATATACGCCGGTAGGGCTTGATGAATTATCAAATAAAAGCGGATTAAGTGTAGATACCTTATTGAT
ACAGCTGTTAGAACTTGAATTGCAAGATCTCGTTATTGCTGAAAAAGGGTTATATCGACGGACTTAA

Domains

Predicted by InterProScan.

• DprA winged helix domain (WHD_DprA) (310-361)

• DNA recombination-mediator protein A (DNA_processg_A) (71-277)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	60.858	100	0.617
dprA	Glaesserella parasuis strain SC1401	50.144	94.293	0.473
dprA	Vibrio cholerae O1 biovar El Tor strain E7946	45.278	97.826	0.443
dprA	Vibrio cholerae strain A1552	45.278	97.826	0.443
dprA	Vibrio campbellii strain DS40M4	41.096	99.185	0.408