Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | D9V75_RS02650 | Genome accession | NZ_CP034861 |
| Coordinates | 561296..561805 (-) | Length | 169 a.a. |
| NCBI ID | WP_158343932.1 | Uniprot ID | A0A4D6YFP4 |
| Organism | Buchnera aphidicola (Muscaphis stroyani) strain Mst | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 556296..566805
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9V75_RS02625 (D9V75_02620) | - | 556822..558414 (-) | 1593 | WP_158343923.1 | peptide chain release factor 3 | - |
| D9V75_RS02630 (D9V75_02625) | ansA | 558717..559736 (+) | 1020 | WP_158343925.1 | asparaginase | - |
| D9V75_RS02635 (D9V75_02630) | - | 559748..560323 (-) | 576 | WP_158343927.1 | NfuA family Fe-S biogenesis protein | - |
| D9V75_RS02640 (D9V75_02635) | - | 560456..560830 (+) | 375 | WP_158343928.1 | alpha/beta fold hydrolase | - |
| D9V75_RS02645 (D9V75_02640) | - | 560782..561231 (+) | 450 | WP_158343930.1 | hypothetical protein | - |
| D9V75_RS02650 (D9V75_02645) | ssb | 561296..561805 (-) | 510 | WP_158343932.1 | single-stranded DNA-binding protein | Machinery gene |
| D9V75_RS02655 (D9V75_02650) | dnaB | 562622..564019 (+) | 1398 | WP_158343934.1 | replicative DNA helicase | - |
| D9V75_RS02660 (D9V75_02655) | gshB | 564330..565307 (+) | 978 | WP_158343936.1 | glutathione synthase | - |
| D9V75_RS02665 (D9V75_02660) | ruvX | 565304..565723 (+) | 420 | WP_158343938.1 | Holliday junction resolvase RuvX | - |
| D9V75_RS02670 (D9V75_02665) | - | 565740..566417 (+) | 678 | WP_158343940.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
Sequence
Protein
Download Length: 169 a.a. Molecular weight: 19086.36 Da Isoelectric Point: 7.2033
>NTDB_id=333373 D9V75_RS02650 WP_158343932.1 561296..561805(-) (ssb) [Buchnera aphidicola (Muscaphis stroyani) strain Mst]
MASRGINKVILIGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKNTGENKEKTEWHRVVLFGKLAEIAGEYLKKGSQVYI
EGTLQTRKWQDQNGLERYTTEVIVNIGGTMQMLGNRNSNLNTASTNENNVSKTKKSDKNNILKNSEKYKINKESLDSSSD
IDFDDEIPF
MASRGINKVILIGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKNTGENKEKTEWHRVVLFGKLAEIAGEYLKKGSQVYI
EGTLQTRKWQDQNGLERYTTEVIVNIGGTMQMLGNRNSNLNTASTNENNVSKTKKSDKNNILKNSEKYKINKESLDSSSD
IDFDDEIPF
Nucleotide
Download Length: 510 bp
>NTDB_id=333373 D9V75_RS02650 WP_158343932.1 561296..561805(-) (ssb) [Buchnera aphidicola (Muscaphis stroyani) strain Mst]
ATGGCAAGTAGAGGAATTAATAAAGTAATTCTTATTGGGCATTTAGGTCAAGACCCTGAAGTTCGTTATATGCCAAATGG
AAATGCGGTGGTTAATATGACATTAGCTACCTCAGAAAATTGGAAAGACAAAAATACTGGAGAAAATAAAGAAAAAACAG
AATGGCATCGAGTAGTTTTATTTGGGAAATTAGCAGAAATTGCGGGTGAATATCTCAAAAAAGGCTCTCAGGTATATATT
GAAGGAACTTTACAGACGAGAAAATGGCAAGACCAAAATGGTTTAGAGCGCTATACGACAGAAGTAATTGTAAACATTGG
CGGAACCATGCAAATGCTAGGAAATCGAAATTCTAATTTAAACACTGCATCGACAAATGAGAACAATGTATCTAAAACAA
AGAAATCGGATAAAAATAACATTTTAAAAAATTCAGAAAAATATAAAATAAATAAAGAAAGTTTAGACTCATCTTCAGAT
ATTGATTTTGATGATGAAATTCCTTTTTAA
ATGGCAAGTAGAGGAATTAATAAAGTAATTCTTATTGGGCATTTAGGTCAAGACCCTGAAGTTCGTTATATGCCAAATGG
AAATGCGGTGGTTAATATGACATTAGCTACCTCAGAAAATTGGAAAGACAAAAATACTGGAGAAAATAAAGAAAAAACAG
AATGGCATCGAGTAGTTTTATTTGGGAAATTAGCAGAAATTGCGGGTGAATATCTCAAAAAAGGCTCTCAGGTATATATT
GAAGGAACTTTACAGACGAGAAAATGGCAAGACCAAAATGGTTTAGAGCGCTATACGACAGAAGTAATTGTAAACATTGG
CGGAACCATGCAAATGCTAGGAAATCGAAATTCTAATTTAAACACTGCATCGACAAATGAGAACAATGTATCTAAAACAA
AGAAATCGGATAAAAATAACATTTTAAAAAATTCAGAAAAATATAAAATAAATAAAGAAAGTTTAGACTCATCTTCAGAT
ATTGATTTTGATGATGAAATTCCTTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
56.742 |
100 |
0.598 |
| ssb | Glaesserella parasuis strain SC1401 |
46.409 |
100 |
0.497 |
| ssb | Neisseria meningitidis MC58 |
43.75 |
100 |
0.456 |
| ssb | Neisseria gonorrhoeae MS11 |
43.182 |
100 |
0.45 |