Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   EJF26_RS07240 Genome accession   NZ_CP034442
Coordinates   1446457..1447215 (+) Length   252 a.a.
NCBI ID   WP_004246572.1    Uniprot ID   F9P259
Organism   Streptococcus oralis subsp. dentisani strain F0392     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1441457..1452215
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EJF26_RS07210 comE 1442047..1442799 (-) 753 WP_000866080.1 competence system response regulator transcription factor ComE Regulator
  EJF26_RS07215 comD 1442796..1444115 (-) 1320 WP_001048121.1 competence system sensor histidine kinase ComD Regulator
  EJF26_RS07220 comC 1444137..1444262 (-) 126 WP_000799680.1 competence-stimulating peptide ComC Regulator
  EJF26_RS07230 rlmH 1444546..1445025 (-) 480 WP_000694224.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  EJF26_RS07235 htrA 1445209..1446399 (+) 1191 WP_000681818.1 S1C family serine protease Regulator
  EJF26_RS07240 spo0J 1446457..1447215 (+) 759 WP_004246572.1 ParB/RepB/Spo0J family partition protein Regulator
  EJF26_RS07245 dnaA 1447438..1448799 (+) 1362 WP_004245972.1 chromosomal replication initiator protein DnaA -
  EJF26_RS07250 dnaN 1448958..1450094 (+) 1137 WP_000581146.1 DNA polymerase III subunit beta -
  EJF26_RS07255 - 1450159..1450353 (+) 195 WP_000285196.1 DUF951 domain-containing protein -
  EJF26_RS07260 ychF 1450438..1451553 (+) 1116 WP_001218696.1 redox-regulated ATPase YchF -
  EJF26_RS07265 pth 1451626..1452195 (+) 570 WP_000163942.1 aminoacyl-tRNA hydrolase -

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29087.56 Da        Isoelectric Point: 9.2688

>NTDB_id=331372 EJF26_RS07240 WP_004246572.1 1446457..1447215(+) (spo0J) [Streptococcus oralis subsp. dentisani strain F0392]
MEKFEMISISDIQKNPYQPRKEFDVKKLKELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLTSIPAVVKH
LSDQEMMIQSIIENLQRENLNPVEEARAYDSLVEKGYTHTEIADKMGKSRPYITNFIRLLSLPDYILSEVENGKISQAHA
RSLVGLDKEQQDYFFQLIKNEDISVRKLETLLTEKKQKKQKKNDSFIKDEEDKLKKLLGLNVEIKLSKKDTGKVIISFSS
QEEYDRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=331372 EJF26_RS07240 WP_004246572.1 1446457..1447215(+) (spo0J) [Streptococcus oralis subsp. dentisani strain F0392]
ATGGAAAAATTTGAAATGATTTCTATCTCGGACATACAAAAAAATCCTTACCAACCTCGGAAAGAATTTGATGTAAAAAA
ATTAAAAGAATTAGCTCAGTCAATCAAAGAAAATGGGGTCATCCAACCCATCATCGTTCGTCAATCTCCTGTAATTGGTT
ATGAAATCCTTGCAGGAGAAAGACGATATCGAGCTTCTCTCTTGGCTGGTCTGACCTCTATTCCAGCCGTTGTGAAACAC
CTCTCAGATCAGGAAATGATGATTCAGTCTATCATTGAGAATTTACAAAGAGAAAACTTGAATCCAGTTGAAGAGGCACG
CGCCTATGACTCTTTAGTTGAAAAAGGATATACCCATACCGAAATAGCAGATAAAATGGGGAAATCTCGTCCTTATATCA
CTAATTTTATTCGTTTGCTTTCCCTACCAGATTATATCTTATCTGAAGTAGAAAATGGAAAAATTTCTCAAGCTCATGCA
CGTTCACTAGTTGGTTTGGATAAAGAGCAGCAAGACTATTTCTTCCAATTAATCAAAAATGAAGACATCTCTGTGAGAAA
GTTAGAAACACTGCTGACAGAGAAAAAACAAAAGAAGCAGAAAAAAAATGATTCTTTCATCAAAGATGAGGAAGATAAAT
TAAAAAAACTACTTGGATTAAATGTAGAAATTAAACTTTCTAAAAAAGATACTGGAAAGGTTATTATTTCTTTTTCAAGC
CAAGAAGAATATGACAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(146-192)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F9P259

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508

Multiple sequence alignment