Detailed information    

insolico Bioinformatically predicted

Overview

Name   cclA/cilC   Type   Machinery gene
Locus tag   EJF26_RS00355 Genome accession   NZ_CP034442
Coordinates   64616..65275 (-) Length   219 a.a.
NCBI ID   WP_000609281.1    Uniprot ID   -
Organism   Streptococcus oralis subsp. dentisani strain F0392     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 59616..70275
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EJF26_RS00325 - 59743..60309 (+) 567 WP_000601935.1 aminodeoxychorismate/anthranilate synthase component II -
  EJF26_RS00330 trpD 60320..61324 (+) 1005 WP_000658688.1 anthranilate phosphoribosyltransferase -
  EJF26_RS00335 trpC 61321..62088 (+) 768 WP_000076565.1 indole-3-glycerol phosphate synthase TrpC -
  EJF26_RS00340 - 62075..62674 (+) 600 WP_000169922.1 phosphoribosylanthranilate isomerase -
  EJF26_RS00345 trpB 62652..63875 (+) 1224 WP_000331249.1 tryptophan synthase subunit beta -
  EJF26_RS00350 trpA 63868..64644 (+) 777 WP_001127005.1 tryptophan synthase subunit alpha -
  EJF26_RS00355 cclA/cilC 64616..65275 (-) 660 WP_000609281.1 A24 family peptidase Machinery gene
  EJF26_RS00360 - 65345..65800 (+) 456 WP_000150789.1 GNAT family N-acetyltransferase -
  EJF26_RS00365 - 65850..66995 (-) 1146 WP_000209250.1 low temperature requirement protein A -
  EJF26_RS00375 - 67798..69087 (+) 1290 WP_001062791.1 hypothetical protein -
  EJF26_RS00380 - 69097..70185 (+) 1089 WP_001055023.1 AI-2E family transporter -

Sequence

Protein


Download         Length: 219 a.a.        Molecular weight: 25030.23 Da        Isoelectric Point: 8.3838

>NTDB_id=331328 EJF26_RS00355 WP_000609281.1 64616..65275(-) (cclA/cilC) [Streptococcus oralis subsp. dentisani strain F0392]
MINLYFFLVGSILASFLGLVIDRFPEQSIIQPASHCDSCQTRLRPLDLIPILSQVFNRFRCRYCKARYPIWYALFELGLG
LLFLTWSWGWISFGQVILITAGLTLGIYDFRHQEYPLLVWMTFHLILMACSGWNLVMVFFLILGIMAHFIDIRMGAGDFL
FLASCALIFNATELLILIQFASATGILAFLSQKKKERLPFVPFLLLAACLIIFGKLLLV

Nucleotide


Download         Length: 660 bp        

>NTDB_id=331328 EJF26_RS00355 WP_000609281.1 64616..65275(-) (cclA/cilC) [Streptococcus oralis subsp. dentisani strain F0392]
ATGATTAATCTTTATTTTTTTCTTGTCGGGAGCATTCTCGCTTCTTTCTTGGGTTTGGTCATTGACCGTTTTCCTGAGCA
ATCCATTATCCAGCCAGCTAGTCACTGCGATTCCTGTCAGACTCGCTTGCGTCCCTTAGATCTAATTCCGATCCTCTCTC
AGGTCTTCAATCGCTTTCGCTGTCGCTACTGCAAGGCTCGCTATCCTATCTGGTATGCCCTCTTTGAACTAGGCTTAGGA
CTCCTCTTTCTGACTTGGTCTTGGGGTTGGATTTCCTTTGGTCAAGTCATCCTAATCACTGCTGGCTTGACCTTGGGAAT
CTACGACTTTCGCCATCAGGAATATCCCTTACTGGTCTGGATGACTTTCCACCTAATCCTCATGGCCTGCTCTGGCTGGA
ATCTGGTTATGGTCTTCTTCCTTATCCTTGGAATCATGGCTCATTTTATTGATATCCGCATGGGCGCAGGGGATTTTCTC
TTTCTAGCTTCTTGCGCTCTCATCTTTAATGCGACAGAGTTACTGATTTTGATTCAGTTTGCTTCGGCGACAGGGATTTT
AGCCTTTCTCTCGCAAAAGAAAAAGGAAAGACTTCCTTTTGTGCCTTTCCTCTTACTTGCTGCTTGTTTGATTATTTTTG
GTAAGCTACTGCTTGTTTGA

Domains

Predicted by InterproScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(8-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis SK321

90.868

100

0.909
  cclA/cilC Streptococcus pneumoniae Rx1

89.498

100

0.895
  cclA/cilC Streptococcus pneumoniae D39

89.498

100

0.895
  cclA/cilC Streptococcus pneumoniae R6

89.498

100

0.895
  cclA/cilC Streptococcus pneumoniae TIGR4

89.041

100

0.89
  cclA/cilC Streptococcus mitis NCTC 12261

88.128

100

0.881

Multiple sequence alignment