Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | EI545_RS01265 | Genome accession | NZ_CP034328 |
| Coordinates | 275161..275694 (+) | Length | 177 a.a. |
| NCBI ID | WP_125323779.1 | Uniprot ID | A0A3S8U1V8 |
| Organism | Tabrizicola piscis strain K13M18 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 270161..280694
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EI545_RS01250 (EI545_01250) | - | 270890..272056 (+) | 1167 | WP_125323777.1 | ABC transporter permease | - |
| EI545_RS01255 (EI545_01255) | - | 272175..274271 (+) | 2097 | WP_125323778.1 | ABC transporter ATP-binding protein | - |
| EI545_RS01260 (EI545_01260) | - | 274309..274875 (-) | 567 | WP_125327182.1 | lytic transglycosylase domain-containing protein | - |
| EI545_RS01265 (EI545_01265) | ssb | 275161..275694 (+) | 534 | WP_125323779.1 | single-stranded DNA-binding protein | Machinery gene |
| EI545_RS01270 (EI545_01270) | - | 275813..276166 (+) | 354 | WP_125323780.1 | SUF system Fe-S cluster assembly protein | - |
| EI545_RS01275 (EI545_01275) | - | 276251..276610 (+) | 360 | WP_125323781.1 | iron-sulfur cluster assembly accessory protein | - |
| EI545_RS01280 (EI545_01280) | tpiA | 276818..277558 (+) | 741 | WP_125323782.1 | triose-phosphate isomerase | - |
| EI545_RS01285 (EI545_01285) | - | 277619..278533 (+) | 915 | WP_125323783.1 | DMT family transporter | - |
| EI545_RS01290 (EI545_01290) | - | 278537..279721 (+) | 1185 | WP_125323784.1 | cytochrome P450 | - |
| EI545_RS01295 (EI545_01295) | - | 279955..280416 (-) | 462 | WP_125323785.1 | Lrp/AsnC family transcriptional regulator | - |
Sequence
Protein
Download Length: 177 a.a. Molecular weight: 18416.93 Da Isoelectric Point: 5.3476
>NTDB_id=330715 EI545_RS01265 WP_125323779.1 275161..275694(+) (ssb) [Tabrizicola piscis strain K13M18]
MAGSVNKVIIVGNLGRDPEVRSFGNGGKVVNLRIATSETWRDKQSGERKERTEWHSVAIYNEALGKIAEQYLKKGSTVYI
EGQLETRKWQDQSGADRYTTEVVLRQFRGELTLLGGRDGGSGGGGGGGYDDRGGYDDSSQGGGFGGGSQGGRGGSGGGSG
GSSGGGGRSDMDDEIPF
MAGSVNKVIIVGNLGRDPEVRSFGNGGKVVNLRIATSETWRDKQSGERKERTEWHSVAIYNEALGKIAEQYLKKGSTVYI
EGQLETRKWQDQSGADRYTTEVVLRQFRGELTLLGGRDGGSGGGGGGGYDDRGGYDDSSQGGGFGGGSQGGRGGSGGGSG
GSSGGGGRSDMDDEIPF
Nucleotide
Download Length: 534 bp
>NTDB_id=330715 EI545_RS01265 WP_125323779.1 275161..275694(+) (ssb) [Tabrizicola piscis strain K13M18]
ATGGCGGGGTCGGTCAACAAGGTCATCATCGTGGGCAACCTCGGCCGTGACCCCGAGGTGCGCAGCTTTGGAAATGGCGG
CAAAGTGGTGAACCTGCGGATTGCGACGTCCGAGACCTGGCGCGACAAACAGTCCGGAGAACGCAAGGAGCGTACCGAGT
GGCACTCGGTCGCGATCTACAACGAAGCTTTGGGCAAGATCGCCGAACAGTATCTGAAGAAAGGCTCAACCGTCTATATC
GAGGGCCAGCTTGAAACCCGCAAATGGCAGGACCAGTCCGGCGCCGACCGCTACACGACCGAAGTGGTCTTGCGCCAGTT
TCGGGGGGAACTCACGCTGCTGGGTGGTCGTGACGGCGGGTCGGGCGGTGGCGGCGGCGGTGGCTATGACGATCGGGGTG
GCTATGATGACAGCAGTCAGGGTGGCGGCTTTGGCGGCGGGTCGCAGGGCGGTCGTGGTGGGTCCGGCGGCGGGTCGGGC
GGCAGCTCAGGTGGCGGCGGGCGGTCCGACATGGATGACGAGATTCCGTTCTGA
ATGGCGGGGTCGGTCAACAAGGTCATCATCGTGGGCAACCTCGGCCGTGACCCCGAGGTGCGCAGCTTTGGAAATGGCGG
CAAAGTGGTGAACCTGCGGATTGCGACGTCCGAGACCTGGCGCGACAAACAGTCCGGAGAACGCAAGGAGCGTACCGAGT
GGCACTCGGTCGCGATCTACAACGAAGCTTTGGGCAAGATCGCCGAACAGTATCTGAAGAAAGGCTCAACCGTCTATATC
GAGGGCCAGCTTGAAACCCGCAAATGGCAGGACCAGTCCGGCGCCGACCGCTACACGACCGAAGTGGTCTTGCGCCAGTT
TCGGGGGGAACTCACGCTGCTGGGTGGTCGTGACGGCGGGTCGGGCGGTGGCGGCGGCGGTGGCTATGACGATCGGGGTG
GCTATGATGACAGCAGTCAGGGTGGCGGCTTTGGCGGCGGGTCGCAGGGCGGTCGTGGTGGGTCCGGCGGCGGGTCGGGC
GGCAGCTCAGGTGGCGGCGGGCGGTCCGACATGGATGACGAGATTCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
48.603 |
100 |
0.492 |
| ssb | Glaesserella parasuis strain SC1401 |
44.444 |
100 |
0.475 |
| ssb | Neisseria gonorrhoeae MS11 |
39.56 |
100 |
0.407 |
| ssb | Neisseria meningitidis MC58 |
40.223 |
100 |
0.407 |