Detailed information
Bioinformatically predicted
Overview
| Name | rcrQ | Type | Regulator |
| Locus tag | HRM2_RS28300 | Genome accession | NC_012108 |
| Coordinates | 1872386..1872604 (+) | Length | 72 a.a. |
| NCBI ID | WP_408605353.1 | Uniprot ID | - |
| Organism | Desulforapulum autotrophicum HRM2 | ||
| Function | regulate competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1867386..1877604
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HRM2_RS08060 (HRM2_16240) | - | 1867587..1867946 (+) | 360 | WP_015903520.1 | response regulator | - |
| HRM2_RS08065 (HRM2_16250) | - | 1867972..1868994 (-) | 1023 | WP_015903521.1 | dual specificity protein phosphatase family protein | - |
| HRM2_RS08070 (HRM2_16260) | - | 1869009..1871522 (-) | 2514 | WP_232364226.1 | PEP/pyruvate-binding domain-containing protein | - |
| HRM2_RS28295 | - | 1871884..1872231 (+) | 348 | WP_408605352.1 | ABC transporter transmembrane domain-containing protein | - |
| HRM2_RS28300 | rcrQ | 1872386..1872604 (+) | 219 | WP_408605353.1 | ATP-binding cassette domain-containing protein | Regulator |
| HRM2_RS08085 (HRM2_16280) | - | 1872888..1874429 (+) | 1542 | WP_015903524.1 | efflux transporter outer membrane subunit | - |
| HRM2_RS08090 (HRM2_16290) | - | 1874494..1875813 (+) | 1320 | WP_015903525.1 | efflux RND transporter periplasmic adaptor subunit | - |
| HRM2_RS08095 (HRM2_16300) | - | 1875810..1876550 (+) | 741 | WP_015903526.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 72 a.a. Molecular weight: 7905.17 Da Isoelectric Point: 10.2097
>NTDB_id=33000 HRM2_RS28300 WP_408605353.1 1872386..1872604(+) (rcrQ) [Desulforapulum autotrophicum HRM2]
MPQGYQTSLSERAGNLSQGQRQLLAIARAILADPGILILDEAISSVDTRTEIRIQTALLNLMKKRTSFVIAH
MPQGYQTSLSERAGNLSQGQRQLLAIARAILADPGILILDEAISSVDTRTEIRIQTALLNLMKKRTSFVIAH
Nucleotide
Download Length: 219 bp
>NTDB_id=33000 HRM2_RS28300 WP_408605353.1 1872386..1872604(+) (rcrQ) [Desulforapulum autotrophicum HRM2]
CTGCCCCAGGGATATCAAACGTCTCTTTCAGAACGGGCCGGAAATCTCAGCCAGGGGCAGCGACAACTTCTGGCTATTGC
CCGGGCCATTCTGGCGGATCCGGGGATTCTGATCCTGGATGAGGCCATCAGCAGTGTTGACACCCGCACTGAAATCCGCA
TTCAGACAGCCCTGCTCAATCTGATGAAAAAACGGACCAGTTTCGTGATTGCCCACTGA
CTGCCCCAGGGATATCAAACGTCTCTTTCAGAACGGGCCGGAAATCTCAGCCAGGGGCAGCGACAACTTCTGGCTATTGC
CCGGGCCATTCTGGCGGATCCGGGGATTCTGATCCTGGATGAGGCCATCAGCAGTGTTGACACCCGCACTGAAATCCGCA
TTCAGACAGCCCTGCTCAATCTGATGAAAAAACGGACCAGTTTCGTGATTGCCCACTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rcrQ | Streptococcus mutans UA159 |
62.5 |
100 |
0.625 |
| comA/nlmT | Streptococcus mutans UA159 |
54.167 |
100 |
0.542 |
| comA | Streptococcus gordonii str. Challis substr. CH1 |
51.389 |
100 |
0.514 |
| comA | Streptococcus mitis SK321 |
51.389 |
100 |
0.514 |
| comA | Streptococcus mitis NCTC 12261 |
50 |
100 |
0.5 |
| comA | Streptococcus pneumoniae TIGR4 |
50 |
100 |
0.5 |
| comA | Streptococcus pneumoniae Rx1 |
50 |
100 |
0.5 |
| comA | Streptococcus pneumoniae D39 |
50 |
100 |
0.5 |
| comA | Streptococcus pneumoniae R6 |
50 |
100 |
0.5 |