Detailed information NTG0328864

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: EHF38_RS01510
• Genome accession: NZ_CP034092
• Coordinates: 315839..316897 (+)
• Length: 352 a.a.
• NCBI ID: WP_005119265.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain A52
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 310839..321897

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EHF38_RS01495 (EHF38_01495)	-	311946..312278 (+)	333	WP_000169603.1	hypothetical protein	-
EHF38_RS01500 (EHF38_01500)	-	312281..313105 (+)	825	WP_002019666.1	putative RNA methyltransferase	-
EHF38_RS01505 (EHF38_01505)	ponA	313123..315678 (-)	2556	WP_000736683.1	penicillin-binding protein PBP1a	-
EHF38_RS01510 (EHF38_01510)	pilM	315839..316897 (+)	1059	WP_005119265.1	pilus assembly protein PilM	Machinery gene
EHF38_RS01515 (EHF38_01515)	pilN	316897..317538 (+)	642	WP_000201231.1	PilN domain-containing protein	Machinery gene
EHF38_RS01520 (EHF38_01520)	pilO	317535..318275 (+)	741	WP_000076097.1	type 4a pilus biogenesis protein PilO	Machinery gene
EHF38_RS01525 (EHF38_01525)	pilP	318286..318813 (+)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
EHF38_RS01530 (EHF38_01530)	pilQ	318876..321041 (+)	2166	WP_001017033.1	type IV pilus secretin PilQ family protein	Machinery gene
EHF38_RS01535 (EHF38_01535)	aroK	321053..321622 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39000.54 Da
• Isoelectric Point: 4.4618

>NTDB_id=328864 EHF38_RS01510 WP_005119265.1 315839..316897(+) (pilM) [Acinetobacter baumannii strain A52]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDSEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
VDLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=328864 EHF38_RS01510 WP_005119265.1 315839..316897(+) (pilM) [Acinetobacter baumannii strain A52]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTCTGAGGTTTTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACCCGCGTTGAAGTGCTTGAATTG
GTAGATTTAAATCCTAAATTGGCTGATGTTGAAAGTTACGCGGTTGAACGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTCTTTGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGTTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	99.432	100	0.994
comM	Acinetobacter nosocomialis M2	98.58	100	0.986
comM	Acinetobacter baylyi ADP1	80.966	100	0.81
pilM	Legionella pneumophila strain ERS1305867	41.525	100	0.418