Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | EH207_RS13965 | Genome accession | NZ_CP034035 |
| Coordinates | 3076590..3077126 (+) | Length | 178 a.a. |
| NCBI ID | WP_137714537.1 | Uniprot ID | A0A4P8QQY2 |
| Organism | Brenneria rubrifaciens strain 6D370 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 3071590..3082126
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EH207_RS13950 (EH207_13965) | - | 3071609..3072814 (+) | 1206 | WP_137714534.1 | amino acid aminotransferase | - |
| EH207_RS13955 (EH207_13970) | - | 3072944..3073363 (-) | 420 | WP_137714535.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| EH207_RS13960 (EH207_13975) | uvrA | 3073428..3076262 (-) | 2835 | WP_137714536.1 | excinuclease ABC subunit UvrA | - |
| EH207_RS13965 (EH207_13980) | ssb | 3076590..3077126 (+) | 537 | WP_137714537.1 | single-stranded DNA-binding protein SSB1 | Machinery gene |
| EH207_RS13970 (EH207_13985) | - | 3077394..3078323 (+) | 930 | WP_137714538.1 | ROK family protein | - |
| EH207_RS13975 (EH207_13990) | yacL | 3078477..3078839 (-) | 363 | WP_137714539.1 | protein YacL | - |
| EH207_RS13980 (EH207_13995) | acnB | 3079033..3081630 (-) | 2598 | WP_137715361.1 | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | - |
Sequence
Protein
Download Length: 178 a.a. Molecular weight: 18952.93 Da Isoelectric Point: 5.7627
>NTDB_id=328473 EH207_RS13965 WP_137714537.1 3076590..3077126(+) (ssb) [Brenneria rubrifaciens strain 6D370]
MASRGVNKVILVGHLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGSLQTRKWTDQAGADRYTTEVVVNIGGTMQMLGGRQGGGGAPASGGQQQGGWGQPQQPQGGASFSGGAQPQPSRPAQNN
APAQSNEPPMDFDDDIPF
MASRGVNKVILVGHLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGSLQTRKWTDQAGADRYTTEVVVNIGGTMQMLGGRQGGGGAPASGGQQQGGWGQPQQPQGGASFSGGAQPQPSRPAQNN
APAQSNEPPMDFDDDIPF
Nucleotide
Download Length: 537 bp
>NTDB_id=328473 EH207_RS13965 WP_137714537.1 3076590..3077126(+) (ssb) [Brenneria rubrifaciens strain 6D370]
ATGGCCAGCAGAGGCGTTAATAAAGTGATTCTTGTCGGACATCTGGGGCAGGACCCGGAAGTTCGCTATATGCCGAATGG
TGGTGCAGTTGCCAACATCACACTGGCCACGTCCGAAAGCTGGCGTGACAAACAAACCGGCGAGCAGAAAGAGAAAACCG
AATGGCACCGCGTCGTCCTGTTCGGCAAGCTGGCTGAAGTGGCGGGCGAATACCTGCGCAAAGGCTCTCAGGTGTATATT
GAAGGTTCACTGCAAACCCGCAAATGGACCGATCAGGCGGGTGCGGATCGCTACACCACCGAAGTCGTGGTCAACATCGG
CGGCACCATGCAAATGCTGGGCGGGCGTCAGGGCGGCGGCGGTGCGCCTGCAAGCGGCGGCCAGCAGCAAGGCGGTTGGG
GACAACCTCAGCAGCCACAGGGCGGCGCCTCATTCAGCGGCGGCGCTCAGCCACAGCCGTCACGTCCTGCGCAGAATAAC
GCGCCGGCGCAAAGCAATGAGCCACCAATGGACTTTGATGACGACATTCCGTTTTAG
ATGGCCAGCAGAGGCGTTAATAAAGTGATTCTTGTCGGACATCTGGGGCAGGACCCGGAAGTTCGCTATATGCCGAATGG
TGGTGCAGTTGCCAACATCACACTGGCCACGTCCGAAAGCTGGCGTGACAAACAAACCGGCGAGCAGAAAGAGAAAACCG
AATGGCACCGCGTCGTCCTGTTCGGCAAGCTGGCTGAAGTGGCGGGCGAATACCTGCGCAAAGGCTCTCAGGTGTATATT
GAAGGTTCACTGCAAACCCGCAAATGGACCGATCAGGCGGGTGCGGATCGCTACACCACCGAAGTCGTGGTCAACATCGG
CGGCACCATGCAAATGCTGGGCGGGCGTCAGGGCGGCGGCGGTGCGCCTGCAAGCGGCGGCCAGCAGCAAGGCGGTTGGG
GACAACCTCAGCAGCCACAGGGCGGCGCCTCATTCAGCGGCGGCGCTCAGCCACAGCCGTCACGTCCTGCGCAGAATAAC
GCGCCGGCGCAAAGCAATGAGCCACCAATGGACTTTGATGACGACATTCCGTTTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
73.913 |
100 |
0.764 |
| ssb | Glaesserella parasuis strain SC1401 |
57.754 |
100 |
0.607 |
| ssb | Neisseria meningitidis MC58 |
46.023 |
98.876 |
0.455 |
| ssb | Neisseria gonorrhoeae MS11 |
46.023 |
98.876 |
0.455 |