Detailed information NTG0325829

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: FNL90_RS00340
• Genome accession: NZ_CP041408
• Coordinates: 54247..55245 (+)
• Length: 332 a.a.
• NCBI ID: WP_047235090.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain 37-97S
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 49247..60245

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FNL90_RS00325 (FNL90_00330)	-	50249..51667 (+)	1419	WP_011888524.1	hypothetical protein	-
FNL90_RS00330 (FNL90_00335)	purB	51687..52979 (+)	1293	WP_047235089.1	adenylosuccinate lyase	-
FNL90_RS00335 (FNL90_00340)	comR	53110..54021 (+)	912	WP_002986681.1	transcriptional regulator Rgg4/ComR	Regulator
FNL90_RS09945	comS	54105..54200 (+)	96	WP_198462994.1	quorum-sensing system DWW-type pheromone	Regulator
FNL90_RS00340 (FNL90_00345)	ruvB	54247..55245 (+)	999	WP_047235090.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
FNL90_RS00345 (FNL90_00350)	-	55383..55820 (+)	438	WP_002994668.1	low molecular weight protein-tyrosine-phosphatase	-
FNL90_RS00350 (FNL90_00355)	-	55843..56244 (+)	402	WP_002986671.1	MORN repeat-containing protein	-
FNL90_RS00355 (FNL90_00360)	-	56241..58016 (+)	1776	WP_047235091.1	acyltransferase family protein	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 37582.10 Da
• Isoelectric Point: 5.1632

>NTDB_id=325829 FNL90_RS00340 WP_047235090.1 54247..55245(+) (ruvB) [Streptococcus pyogenes strain 37-97S]
MARILDNDVMGNEEFSDRTLRPQYLHEYIGQDKVKEQFAIFIEAAKRRDESLDHVLLFGPPGLGKTTMAFVIANELGVNL
KQTSGPAVEKAGDLVAILNELEPGDILFIDEIHRMPMSVEEVLYSAMEDFYIDIMIGAGDTSRSIHLDLPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYQEKDLTEIVERTATIFEIKIDHEAARKLACRSRGTPRIANRLLKRVRDYAQIIGDGIIT
SQITDRALTMLDVDREGLDYIDQKILRTMIEMYQGGPVGLGTLSVNIAEERNTVEEMYEPYLIQKGFLMRTRTGRVATQK
AYRHLGYPYQNT

Nucleotide

• Length: 999 bp

>NTDB_id=325829 FNL90_RS00340 WP_047235090.1 54247..55245(+) (ruvB) [Streptococcus pyogenes strain 37-97S]
ATGGCTAGAATTTTAGACAATGATGTAATGGGAAATGAGGAGTTTTCGGATCGGACTCTTCGCCCTCAATATCTACACGA
ATATATTGGACAAGATAAAGTTAAGGAACAATTCGCTATTTTTATAGAAGCAGCTAAAAGACGTGACGAATCTTTAGACC
ATGTTTTATTATTTGGACCTCCAGGACTGGGAAAAACAACAATGGCATTTGTGATTGCCAATGAATTGGGAGTTAATTTA
AAGCAAACTTCAGGTCCTGCCGTTGAGAAAGCTGGAGATTTAGTAGCTATTTTAAATGAATTAGAACCAGGGGATATTTT
GTTTATTGATGAAATTCACCGCATGCCAATGTCTGTCGAGGAAGTACTATATAGTGCTATGGAAGACTTCTATATTGATA
TTATGATTGGCGCTGGAGATACTAGTCGTAGTATTCATTTGGATCTGCCTCCATTTACATTGATTGGTGCTACTACACGT
GCAGGCATGTTATCTAATCCCCTCAGAGCTCGTTTTGGTATCACTGGTCACATGGAATACTATCAAGAAAAGGATTTGAC
AGAGATTGTGGAGCGTACAGCTACTATTTTTGAAATAAAAATAGACCATGAAGCTGCACGGAAATTAGCTTGTCGCAGTA
GAGGAACGCCCCGCATTGCTAATCGATTACTAAAACGGGTGCGTGACTATGCTCAAATTATTGGTGATGGCATCATAACG
TCTCAAATAACTGATAGAGCTTTGACTATGTTAGATGTTGACCGCGAAGGTCTCGATTACATTGATCAGAAAATTTTACG
AACGATGATTGAGATGTATCAGGGAGGACCAGTTGGTTTGGGGACATTATCTGTGAATATTGCCGAGGAGCGTAATACAG
TTGAAGAGATGTATGAACCCTACTTAATTCAAAAAGGCTTTCTCATGCGAACACGAACAGGTCGTGTAGCGACGCAAAAG
GCTTATCGTCATCTTGGCTATCCCTATCAAAACACTTAA

Domains

Predicted by InterProScan.

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-325)

• RuvB AAA lid domain (AAA_lid_4) (181-254)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae R6	84.848	99.398	0.843
ruvB	Streptococcus pneumoniae D39	84.848	99.398	0.843
ruvB	Streptococcus pneumoniae TIGR4	84.545	99.398	0.84
ruvB	Bacillus subtilis subsp. subtilis str. 168	58.824	97.289	0.572
ruvB	Helicobacter pylori 26695	48.936	99.096	0.485
ruvB	Synechocystis sp. PCC 6803	50.16	94.277	0.473