Detailed information NTG0323847

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: CNQ82_RS06270
• Genome accession: NZ_CP033460
• Coordinates: 1332594..1333511 (+)
• Length: 305 a.a.
• NCBI ID: WP_123144556.1
• Uniprot ID: -
• Organism: Staphylococcus debuckii strain SDB 2975
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1327594..1338511

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CNQ82_RS06250 (CNQ82_06250)	ylqF	1328399..1329268 (+)	870	WP_123144553.1	ribosome biogenesis GTPase YlqF	-
CNQ82_RS06255 (CNQ82_06255)	-	1329268..1330056 (+)	789	WP_123144554.1	ribonuclease HII	-
CNQ82_RS06260 (CNQ82_06260)	sucC	1330258..1331424 (+)	1167	WP_123144555.1	ADP-forming succinate--CoA ligase subunit beta	-
CNQ82_RS06265 (CNQ82_06265)	sucD	1331445..1332359 (+)	915	WP_095105657.1	succinate--CoA ligase subunit alpha	-
CNQ82_RS06270 (CNQ82_06270)	dprA	1332594..1333511 (+)	918	WP_123144556.1	DNA-processing protein DprA	Machinery gene
CNQ82_RS06275 (CNQ82_06275)	topA	1333628..1335697 (+)	2070	WP_123144557.1	type I DNA topoisomerase	-
CNQ82_RS06280 (CNQ82_06280)	trmFO	1335782..1337092 (+)	1311	WP_123144558.1	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	-
CNQ82_RS06285 (CNQ82_06285)	xerC	1337215..1338105 (+)	891	WP_123144559.1	tyrosine recombinase XerC	-

Sequence

Protein

• Length: 305 a.a.
• Molecular weight: 34597.63 Da
• Isoelectric Point: 8.5804

>NTDB_id=323847 CNQ82_RS06270 WP_123144556.1 1332594..1333511(+) (dprA) [Staphylococcus debuckii strain SDB 2975]
MTQHESTLELLKLRYAGYTTQQLIRLFKFCPLFLRLSPSDKMTNLRQFTYTSKIRNPAAYLTRYSALSISTILNNLDQHG
VKYISIYDAAYPRLLKEIYDPPFILFYKGNIELLQHTHFLGVVGSRQSTAYTAHALSFLFSHISTSQLTIVSGLATGADS
EAHLSALQNQLPTIGVLAFGHAHHYPKSNLHLRNEIEEKGLTLSEYIPEDEPRKFKFPERNRLISGLSQGVLVTESKERS
GAQITIDLALQQNRNVYVLPGSIFQELTKGNLKRAQEGATIVLEIDDILADYNCEIHCKWMSTFK

Nucleotide

• Length: 918 bp

>NTDB_id=323847 CNQ82_RS06270 WP_123144556.1 1332594..1333511(+) (dprA) [Staphylococcus debuckii strain SDB 2975]
ATGACACAACACGAATCAACTCTAGAACTCCTAAAACTCCGTTATGCTGGCTATACAACACAGCAATTGATACGGCTCTT
CAAATTCTGTCCTCTTTTTTTACGCTTAAGTCCCTCAGATAAAATGACAAATCTTCGACAATTTACTTATACAAGCAAGA
TACGAAATCCTGCTGCTTATCTCACACGTTATTCTGCACTAAGTATTTCTACTATCCTAAACAACCTCGATCAACATGGC
GTGAAATATATTTCTATTTACGATGCAGCCTATCCACGTTTGTTAAAAGAAATCTATGATCCTCCGTTTATCCTATTTTA
TAAAGGCAATATTGAATTGCTCCAGCATACTCATTTCTTAGGAGTAGTCGGCTCCAGACAATCGACAGCTTATACCGCCC
ATGCACTTTCTTTTTTATTTTCACATATTTCTACATCGCAACTTACTATTGTCTCTGGTTTAGCCACTGGGGCAGACAGT
GAAGCCCATCTTTCAGCACTTCAAAACCAACTCCCTACAATTGGTGTCTTGGCATTCGGCCATGCACATCACTATCCCAA
ATCGAATTTGCATCTTAGAAATGAAATAGAAGAAAAAGGTTTGACTCTCAGTGAGTATATTCCTGAAGATGAACCGCGCA
AATTTAAATTTCCTGAAAGAAATCGACTCATCAGCGGACTTTCGCAAGGTGTGTTGGTGACTGAGTCGAAGGAGAGAAGC
GGTGCACAAATTACCATTGATTTAGCATTACAGCAAAACCGCAATGTCTATGTTCTGCCTGGCAGTATTTTTCAAGAATT
GACCAAAGGGAATTTGAAACGTGCGCAAGAAGGTGCAACTATTGTGTTAGAAATCGATGATATATTAGCAGATTATAATT
GTGAAATTCATTGTAAATGGATGAGTACTTTCAAGTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (77-283)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Staphylococcus aureus N315	52.778	94.426	0.498
dprA	Staphylococcus aureus MW2	52.249	94.754	0.495
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	39.161	93.77	0.367
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	38.732	93.115	0.361
dprA/cilB/dalA	Streptococcus pneumoniae D39	38.732	93.115	0.361
dprA/cilB/dalA	Streptococcus pneumoniae R6	38.732	93.115	0.361
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	38.732	93.115	0.361
dprA/cilB/dalA	Streptococcus mitis SK321	38.732	93.115	0.361