Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   E1E63_RS06575 Genome accession   NZ_CP039992
Coordinates   1313766..1314389 (-) Length   207 a.a.
NCBI ID   WP_001208756.1    Uniprot ID   -
Organism   Staphylococcus aureus strain Lr3     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1308766..1319389
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E1E63_RS06550 (E1E63_06550) rpmG 1310342..1310491 (+) 150 WP_001265708.1 50S ribosomal protein L33 -
  E1E63_RS06555 (E1E63_06555) rpsN 1310945..1311214 (+) 270 WP_001085655.1 30S ribosomal protein S14 -
  E1E63_RS06560 (E1E63_06560) guaC 1311371..1312348 (+) 978 WP_000688136.1 GMP reductase -
  E1E63_RS06570 (E1E63_06570) - 1312370..1313386 (+) 1017 WP_170957313.1 CAP domain-containing protein -
  E1E63_RS06575 (E1E63_06575) dinR/lexA 1313766..1314389 (-) 624 WP_001208756.1 transcriptional repressor LexA Regulator
  E1E63_RS06580 (E1E63_06580) sosA 1314532..1314765 (+) 234 WP_000499647.1 DNA damage-induced cell division inhibitor SosA -
  E1E63_RS06585 (E1E63_06585) - 1314901..1315140 (+) 240 WP_000071351.1 DUF896 domain-containing protein -
  E1E63_RS06590 (E1E63_06590) recP/tkt 1315261..1317249 (+) 1989 WP_138109874.1 transketolase Machinery gene
  E1E63_RS06595 (E1E63_06595) - 1317527..1317769 (+) 243 WP_000246909.1 YneF family protein -
  E1E63_RS06600 (E1E63_06600) - 1317756..1317854 (+) 99 WP_001789897.1 hypothetical protein -
  E1E63_RS06605 (E1E63_06605) - 1317948..1318415 (+) 468 WP_000966142.1 CcdC family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23345.57 Da        Isoelectric Point: 4.8867

>NTDB_id=319075 E1E63_RS06575 WP_001208756.1 1313766..1314389(-) (dinR/lexA) [Staphylococcus aureus strain Lr3]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNENINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=319075 E1E63_RS06575 WP_001208756.1 1313766..1314389(-) (dinR/lexA) [Staphylococcus aureus strain Lr3]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCGACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGAAAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAATATTT
TCCATTACCTGAACACTTAACATCGACACACAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657

Multiple sequence alignment