Detailed information NTG0317302

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: D7I46_RS06430
• Genome accession: NZ_CP032627
• Coordinates: 1378661..1379653 (-)
• Length: 330 a.a.
• NCBI ID: WP_120772148.1
• Uniprot ID: A0A387BIN8
• Organism: Lactococcus allomyrinae strain 1JSPR-7
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1373661..1384653

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D7I46_RS06410 (D7I46_06410)	-	1373998..1374693 (-)	696	WP_120772144.1	O-methyltransferase	-
D7I46_RS06415 (D7I46_06415)	-	1374714..1375547 (-)	834	WP_120772145.1	aminoglycoside 6-adenylyltransferase	-
D7I46_RS06420 (D7I46_06420)	pepF	1375681..1377474 (-)	1794	WP_120772146.1	oligoendopeptidase F	Regulator
D7I46_RS06425 (D7I46_06425)	-	1377669..1378535 (-)	867	WP_120772147.1	HAD-IIB family hydrolase	-
D7I46_RS06430 (D7I46_06430)	coiA	1378661..1379653 (-)	993	WP_120772148.1	competence protein CoiA	Machinery gene
D7I46_RS06435 (D7I46_06435)	-	1379767..1380846 (-)	1080	WP_420844004.1	YdcF family protein	-
D7I46_RS06440 (D7I46_06440)	-	1381046..1382467 (-)	1422	WP_120772150.1	NCS2 family permease	-
D7I46_RS06445 (D7I46_06445)	-	1383032..1383856 (+)	825	WP_120772151.1	HAD family hydrolase	-
D7I46_RS06450 (D7I46_06450)	-	1384023..1384541 (+)	519	WP_120772152.1	DoxX family membrane protein	-

Sequence

Protein

• Length: 330 a.a.
• Molecular weight: 38905.84 Da
• Isoelectric Point: 9.4985

>NTDB_id=317302 D7I46_RS06430 WP_120772148.1 1378661..1379653(-) (coiA) [Lactococcus allomyrinae strain 1JSPR-7]
MLTAIDEKNKLVNLLESSPEELTGQYFCPACKTEVVLKNGNIKITHFAHKTLQNCESWTENESVQHLTLKKILYRWFKKS
EKVEVEKYLPELKQTPDLLVNDKIAIEVQCSSLSLKRLKERTENYQTHGYSVIWLMGKKLWLSHQLTELQKNLMYFSENR
GFYFWELDLERKKLRLKSLIHQDLRGNILHLTEEILFGHGELLTHLRQPFSAQAPLSLPVSADRGLFHFVRQQLFHRSTK
WLEIQEKYYQQGKNLLTENFDKPYIAPPGLNLLSVSDDKISSANFTQITQNLVPYYQNFLENFKKNPRNKLYPPRFYAII
KEVNNETKAK

Nucleotide

• Length: 993 bp

>NTDB_id=317302 D7I46_RS06430 WP_120772148.1 1378661..1379653(-) (coiA) [Lactococcus allomyrinae strain 1JSPR-7]
ATGCTGACAGCAATTGATGAAAAAAATAAACTGGTTAACTTATTAGAAAGTTCTCCAGAAGAACTGACTGGGCAATACTT
TTGTCCTGCTTGCAAAACAGAAGTTGTCTTGAAAAATGGAAATATAAAAATTACACATTTTGCGCACAAAACTTTACAAA
ATTGTGAATCGTGGACTGAAAATGAGTCTGTGCAACATTTAACATTAAAGAAGATACTCTATCGTTGGTTCAAAAAGTCC
GAAAAAGTGGAAGTAGAAAAATATCTTCCGGAGTTAAAACAAACCCCTGATTTGCTGGTTAACGATAAAATTGCAATAGA
AGTTCAATGTTCCTCTCTTTCGCTCAAACGCCTAAAAGAACGAACAGAAAACTATCAAACTCATGGTTATTCAGTGATTT
GGCTAATGGGAAAGAAATTATGGCTGAGTCATCAACTGACAGAACTCCAAAAAAATTTGATGTATTTTTCTGAAAATCGA
GGATTTTATTTCTGGGAACTTGATTTAGAACGAAAAAAATTAAGATTAAAATCATTGATTCATCAGGACTTGAGGGGCAA
CATTTTACATTTAACAGAAGAAATATTATTTGGTCACGGAGAACTGTTGACACATTTGCGCCAGCCTTTTTCCGCACAAG
CTCCATTGTCATTACCTGTCAGTGCTGACAGAGGGCTTTTTCATTTTGTCAGACAACAACTCTTTCATCGGTCAACGAAA
TGGTTGGAAATTCAAGAAAAATATTATCAGCAAGGGAAAAATTTACTGACAGAAAACTTTGACAAACCTTATATCGCGCC
ACCAGGACTCAATTTACTTTCTGTCAGTGATGACAAGATTTCATCAGCAAATTTCACACAAATTACACAAAATTTAGTGC
CCTACTATCAAAATTTTTTAGAAAATTTCAAAAAAAATCCGCGAAACAAGCTCTATCCACCTCGTTTCTATGCTATAATA
AAAGAAGTTAACAATGAAACAAAGGCAAAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (1-252)

3D structure

• AlphaFold DB: A0A387BIN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Lactococcus lactis subsp. cremoris KW2	63.19	98.788	0.624
coiA	Streptococcus mitis NCTC 12261	45.625	96.97	0.442
coiA	Streptococcus pneumoniae TIGR4	45.031	97.576	0.439
coiA	Streptococcus pneumoniae Rx1	44.72	97.576	0.436
coiA	Streptococcus pneumoniae D39	44.72	97.576	0.436
coiA	Streptococcus pneumoniae R6	44.72	97.576	0.436