Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiC   Type   Regulator
Locus tag   D7D53_RS07525 Genome accession   NZ_CP032621
Coordinates   1511705..1513201 (-) Length   498 a.a.
NCBI ID   WP_000759916.1    Uniprot ID   A0A387B3P8
Organism   Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1506705..1518201
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D7D53_RS07505 (D7D53_07505) - 1507336..1508313 (-) 978 WP_120770607.1 ABC transporter substrate-binding protein -
  D7D53_RS07510 (D7D53_07510) amiF 1508766..1509692 (-) 927 WP_001291285.1 ATP-binding cassette domain-containing protein Regulator
  D7D53_RS07515 (D7D53_07515) amiE 1509703..1510770 (-) 1068 WP_000159550.1 ABC transporter ATP-binding protein Regulator
  D7D53_RS07520 (D7D53_07520) amiD 1510779..1511705 (-) 927 WP_000103691.1 oligopeptide ABC transporter permease OppC Regulator
  D7D53_RS07525 (D7D53_07525) amiC 1511705..1513201 (-) 1497 WP_000759916.1 ABC transporter permease Regulator
  D7D53_RS07530 (D7D53_07530) amiA3 1513268..1515256 (-) 1989 WP_120770608.1 peptide ABC transporter substrate-binding protein Regulator
  D7D53_RS07545 (D7D53_07545) - 1515788..1517119 (-) 1332 WP_042750034.1 hemolysin family protein -

Sequence

Protein


Download         Length: 498 a.a.        Molecular weight: 55661.16 Da        Isoelectric Point: 9.4223

>NTDB_id=317205 D7D53_RS07525 WP_000759916.1 1511705..1513201(-) (amiC) [Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)]
MKKYIFMRVLRSLVSIFLVTTLTYTIIYTMVPRKLIFKQDTNYNKIATTADKRDNYENTVYERMGYIEYYDTKELQEKAS
QMDASVTVEANDTNKAIYEKYIKQIGHGWTLGEFTESGQFYATREIPIFERVFKFYANLIDIDHTNKIQDPENPDLKRYL
RFENDPAIGWSLVGSGTKHKYLLYFNSQFPFVHQNFVNINLGDSYPTYANSPVLQVITQGQGQTKTSQVQFPTGKKTSSV
NIYSRTYKSPSQADSREVANYGKDDPYTATESNYQYPSMIASSAVVGLIGLVISYAIAVPLGSAMARFKNTWIDSFSTGA
LTFLMALPTIALVYIVRLAGSSIGLPDSFPILGAGDWRSYVLPAVILGLLGAPGTAIWIRRYMIDLQSQDFVRFARAKGL
SEKEISNKHIFKNAMVPLVSGIPGAVIGVIGGATLTETVFAFPGMGKMLIDSVKASNNSMVVGLVFIFTCISIFSLLLGD
IWMTIIDPRIKLTEKGGK

Nucleotide


Download         Length: 1497 bp        

>NTDB_id=317205 D7D53_RS07525 WP_000759916.1 1511705..1513201(-) (amiC) [Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)]
ATGAAAAAATATATTTTTATGCGTGTTTTGCGGTCATTGGTTTCTATCTTCTTAGTAACAACCTTGACTTACACGATTAT
CTATACAATGGTTCCTCGAAAATTGATTTTCAAACAGGATACCAACTATAACAAGATTGCGACAACTGCTGATAAACGTG
ATAACTATGAGAATACTGTTTATGAGCGTATGGGTTATATCGAGTACTACGATACCAAAGAGTTGCAAGAGAAAGCTAGT
CAGATGGATGCCTCTGTAACTGTTGAAGCAAATGACACCAACAAGGCCATCTATGAAAAATACATTAAACAAATCGGTCA
TGGTTGGACCTTGGGAGAATTTACTGAAAGTGGCCAATTCTATGCTACTCGTGAAATCCCAATTTTTGAACGTGTTTTCA
AATTCTATGCTAACTTGATTGACATTGATCATACAAATAAAATTCAAGACCCTGAAAATCCAGACTTGAAACGTTACCTT
CGTTTCGAAAACGATCCAGCTATCGGATGGTCCTTGGTCGGTTCAGGAACAAAACACAAATATCTCTTGTACTTCAACAG
TCAGTTCCCATTTGTGCATCAAAACTTTGTGAACATTAATTTAGGTGACTCTTATCCAACCTATGCTAATAGTCCTGTTT
TACAGGTTATTACTCAAGGACAAGGGCAAACAAAAACATCTCAAGTTCAGTTCCCAACAGGTAAGAAAACTTCTTCTGTA
AATATTTACTCAAGAACCTACAAATCACCTAGTCAGGCTGACTCTCGTGAAGTAGCTAACTATGGGAAAGATGATCCATA
TACTGCAACTGAAAGCAACTACCAATATCCTTCTATGATTGCCAGCTCTGCTGTCGTTGGATTGATCGGTTTGGTGATTT
CTTATGCGATTGCTGTGCCACTTGGTTCAGCTATGGCTCGCTTCAAGAACACATGGATTGATAGTTTCTCAACAGGGGCT
TTGACCTTCTTGATGGCTCTTCCAACAATTGCCTTGGTTTATATCGTTCGTTTAGCTGGTTCTTCAATCGGCTTGCCAGA
TTCATTCCCTATCTTGGGTGCTGGAGATTGGCGTTCGTATGTTTTACCAGCAGTTATCCTTGGTTTGTTGGGTGCTCCTG
GTACAGCTATTTGGATTCGTCGTTATATGATTGACTTGCAATCACAAGACTTTGTACGTTTTGCTCGTGCAAAAGGTTTG
TCTGAAAAAGAAATTTCAAACAAACACATCTTTAAAAATGCCATGGTTCCGCTGGTTTCAGGGATTCCTGGTGCTGTTAT
CGGGGTTATCGGTGGTGCAACCCTTACTGAAACAGTCTTCGCCTTCCCAGGTATGGGTAAAATGTTGATTGACTCTGTAA
AAGCATCTAATAACTCTATGGTCGTAGGTCTTGTCTTCATCTTTACATGTATTTCTATCTTCTCACTTCTTTTGGGAGAT
ATTTGGATGACGATTATCGACCCACGTATTAAATTGACTGAGAAAGGAGGCAAATAA

Domains

Predicted by InterproScan.

Binding-protein-dependent transport system inner membrane component (BPD_transp_1)

(298-491)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A387B3P8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiC Streptococcus salivarius strain HSISS4

76.506

100

0.765
  amiC Streptococcus thermophilus LMG 18311

76.305

100

0.763
  amiC Streptococcus thermophilus LMD-9

75.904

100

0.759

Multiple sequence alignment