Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   BEN74_RS10085 Genome accession   NZ_CP032279
Coordinates   1763247..1764383 (+) Length   378 a.a.
NCBI ID   WP_068910223.1    Uniprot ID   -
Organism   Acinetobacter sp. WCHAc010034     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 1758247..1769383
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BEN74_RS10065 (BEN74_10065) - 1758763..1760808 (-) 2046 WP_068910211.1 TonB-dependent copper receptor -
  BEN74_RS10070 (BEN74_10070) - 1760877..1761326 (-) 450 WP_068910214.1 DUF2946 family protein -
  BEN74_RS10075 (BEN74_10075) def 1761423..1761953 (-) 531 WP_068910217.1 peptide deformylase -
  BEN74_RS10080 (BEN74_10080) tsaP 1762073..1763227 (+) 1155 WP_068910220.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  BEN74_RS10085 (BEN74_10085) dprA 1763247..1764383 (+) 1137 WP_068910223.1 DNA-processing protein DprA Machinery gene
  BEN74_RS10090 (BEN74_10090) - 1764429..1764998 (+) 570 WP_068910226.1 L-threonylcarbamoyladenylate synthase -
  BEN74_RS10095 (BEN74_10095) - 1765394..1766302 (-) 909 WP_068910318.1 DMT family transporter -
  BEN74_RS10100 (BEN74_10100) - 1766432..1767211 (+) 780 WP_068910320.1 helix-turn-helix transcriptional regulator -
  BEN74_RS10105 (BEN74_10105) - 1767477..1768022 (+) 546 WP_068910322.1 glutathione peroxidase -
  BEN74_RS10110 (BEN74_10110) - 1768178..1768747 (+) 570 WP_068910228.1 hypothetical protein -
  BEN74_RS10115 (BEN74_10115) - 1768862..1769305 (+) 444 WP_068910324.1 AAA family ATPase -

Sequence


Protein


Download         Length: 378 a.a.        Molecular weight: 41700.36 Da        Isoelectric Point: 6.7738

>NTDB_id=314715 BEN74_RS10085 WP_068910223.1 1763247..1764383(+) (dprA) [Acinetobacter sp. WCHAc010034]
MLNPLSQAQIEAITLWHLVQHSLAGFRKIQAHYPSLADALQAGQLPVWQALGLHKSHLQRFQEFHTAQGRQQFQRCLQQI
QQQSDFVLTCADADYPQQLLPYCDRPPVIFGQGDAQALLQPQIAIVGSRKPSPHGCQTAYDFAFYLSEQGFYICSGLAQG
IDQAAHQAALKHRRTIAVMGTGLDQTYPPQHQGLRRDIQERGGAVISEFLPQTRPLPQHFPRRNRIVSGLSLGVIVAEAG
LKSGSLITAKTAAEQGKAVFAIPGHIYGEFHQGCHQLIREGAILIDHPQQALEDLALPAQWQAAQLQAAEPAAADEPDVP
EHLHELHQQLDWTGQTLDQLAQRTQQDAPALTAQLMELELLGLALQQAGCYLRCRAGK

Nucleotide


Download         Length: 1137 bp        

>NTDB_id=314715 BEN74_RS10085 WP_068910223.1 1763247..1764383(+) (dprA) [Acinetobacter sp. WCHAc010034]
ATGCTGAATCCGTTATCACAAGCGCAAATTGAAGCAATTACCTTGTGGCATCTGGTTCAGCATTCGCTGGCCGGCTTCCG
CAAAATTCAGGCGCATTACCCCAGCCTTGCCGATGCGCTGCAGGCCGGCCAGTTGCCGGTTTGGCAGGCTTTAGGCCTGC
ATAAAAGCCATCTGCAGCGCTTTCAGGAATTCCATACCGCGCAAGGCCGGCAGCAATTCCAGCGCTGCCTGCAGCAGATT
CAGCAGCAGAGCGACTTTGTGCTGACCTGCGCCGATGCGGATTATCCGCAGCAGCTGCTCCCCTATTGCGACCGGCCGCC
GGTGATTTTCGGCCAGGGCGATGCGCAAGCTTTGCTGCAGCCTCAAATTGCCATTGTCGGCAGCCGCAAGCCCAGCCCGC
ACGGCTGCCAGACCGCCTATGACTTTGCTTTCTATTTAAGCGAACAGGGCTTTTACATCTGCAGCGGCCTGGCGCAAGGC
ATTGACCAGGCTGCCCATCAAGCCGCGCTGAAGCACCGGCGCACCATCGCCGTGATGGGCACCGGGCTGGATCAGACCTA
TCCGCCGCAGCATCAGGGCTTAAGGCGGGACATTCAGGAGCGCGGCGGCGCCGTCATCAGCGAGTTCCTGCCGCAGACCC
GGCCTCTGCCGCAGCATTTTCCGCGCCGCAACCGCATTGTCAGCGGGCTGAGCCTGGGCGTAATTGTCGCCGAAGCCGGC
TTGAAAAGCGGCTCCCTCATCACCGCAAAGACCGCAGCCGAACAGGGCAAAGCAGTTTTCGCCATTCCCGGCCATATTTA
CGGCGAATTTCATCAAGGCTGCCATCAGCTGATCCGCGAAGGCGCAATCCTGATTGACCATCCGCAGCAGGCGCTTGAAG
ATTTGGCGCTGCCGGCGCAATGGCAAGCGGCGCAGCTGCAGGCTGCAGAGCCCGCCGCGGCGGACGAGCCGGATGTTCCT
GAACACCTGCACGAACTGCATCAGCAGCTGGACTGGACAGGCCAGACTTTGGACCAGCTGGCGCAGCGCACGCAGCAGGA
TGCGCCGGCTCTGACCGCGCAGCTGATGGAATTGGAGCTGCTGGGCCTGGCCCTGCAGCAGGCCGGCTGCTATCTGCGTT
GCCGTGCAGGCAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

63.298

99.471

0.63

  dprA Acinetobacter baumannii D1279779

63.032

99.471

0.627

  dprA Acinetobacter baylyi ADP1

60.105

100

0.606

  dprA Vibrio cholerae strain A1552

43.03

87.302

0.376


Multiple sequence alignment