Detailed information    

insolico Bioinformatically predicted

Overview

Name   tsaP   Type   Machinery gene
Locus tag   BEN74_RS10080 Genome accession   NZ_CP032279
Coordinates   1762073..1763227 (+) Length   384 a.a.
NCBI ID   WP_068910220.1    Uniprot ID   A0A3B7PVS3
Organism   Acinetobacter sp. WCHAc010034     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1757073..1768227
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BEN74_RS10065 (BEN74_10065) - 1758763..1760808 (-) 2046 WP_068910211.1 TonB-dependent copper receptor -
  BEN74_RS10070 (BEN74_10070) - 1760877..1761326 (-) 450 WP_068910214.1 DUF2946 family protein -
  BEN74_RS10075 (BEN74_10075) def 1761423..1761953 (-) 531 WP_068910217.1 peptide deformylase -
  BEN74_RS10080 (BEN74_10080) tsaP 1762073..1763227 (+) 1155 WP_068910220.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  BEN74_RS10085 (BEN74_10085) dprA 1763247..1764383 (+) 1137 WP_068910223.1 DNA-processing protein DprA Machinery gene
  BEN74_RS10090 (BEN74_10090) - 1764429..1764998 (+) 570 WP_068910226.1 L-threonylcarbamoyladenylate synthase -
  BEN74_RS10095 (BEN74_10095) - 1765394..1766302 (-) 909 WP_068910318.1 DMT family transporter -
  BEN74_RS10100 (BEN74_10100) - 1766432..1767211 (+) 780 WP_068910320.1 helix-turn-helix transcriptional regulator -
  BEN74_RS10105 (BEN74_10105) - 1767477..1768022 (+) 546 WP_068910322.1 glutathione peroxidase -

Sequence

Protein


Download         Length: 384 a.a.        Molecular weight: 41555.95 Da        Isoelectric Point: 9.4177

>NTDB_id=314714 BEN74_RS10080 WP_068910220.1 1762073..1763227(+) (tsaP) [Acinetobacter sp. WCHAc010034]
MKKVLKGTPALSALGFKKQLLALAVCVSIGAGLAGMAEAAPARNINPPALKAGAPQVYVVKKGDTLWDISKRFLKNPVRW
PEIWASNKHVKNPHWIFPGDRLLMCTYNGQPIIGKDEGDGCEGIIRRYAGGTKLQPQVRIESLNNAIPVIPLEYIKQWLE
RSMVIAPDALQGTPYILGTADQRVLAAKGQTVYARGGGMEVGQRYAVYREGEPYMFMDAAGKKFNAGLELTQVASGVAVR
GENDITTLELTSTYNGEVRRGDRVLPEYDPMLPTLFYPTSAENITAGGSIVRVLGSIGTAAAHSVVTIDRGTLHGVQTGH
VFSVNQKGETVTDPKTKERIQLPGQRIGSVMVFKAFDNLSYAYVLDSELPIKVGAGIQPPLLDE

Nucleotide


Download         Length: 1155 bp        

>NTDB_id=314714 BEN74_RS10080 WP_068910220.1 1762073..1763227(+) (tsaP) [Acinetobacter sp. WCHAc010034]
ATGAAAAAGGTTTTGAAGGGCACGCCGGCTTTGAGTGCCTTGGGGTTTAAAAAACAATTATTGGCGCTTGCCGTCTGTGT
AAGCATTGGGGCTGGCCTTGCCGGCATGGCTGAAGCAGCGCCTGCCCGCAACATCAATCCGCCGGCGCTGAAAGCCGGAG
CGCCGCAAGTTTATGTGGTGAAAAAAGGCGATACCCTGTGGGATATTTCCAAAAGATTCTTAAAAAACCCGGTGCGCTGG
CCTGAAATCTGGGCCAGCAACAAGCATGTGAAAAACCCGCACTGGATTTTTCCCGGCGACCGCCTGCTGATGTGCACCTA
CAATGGCCAGCCGATTATCGGCAAGGATGAAGGCGACGGCTGTGAAGGCATCATCCGCCGCTATGCCGGCGGCACCAAGC
TGCAGCCGCAGGTGCGGATTGAGTCGCTGAACAATGCGATTCCGGTCATTCCGCTGGAATACATCAAGCAGTGGCTGGAA
CGCAGCATGGTGATTGCGCCGGATGCGCTGCAGGGCACGCCGTACATTTTAGGCACGGCCGATCAGCGCGTGCTGGCCGC
TAAAGGCCAGACGGTTTATGCGCGCGGCGGCGGCATGGAAGTAGGCCAGCGCTATGCGGTCTACCGTGAAGGCGAACCGT
ACATGTTCATGGACGCCGCCGGCAAAAAATTCAATGCCGGCCTTGAATTGACCCAAGTCGCTTCAGGCGTTGCGGTGCGC
GGTGAAAATGACATCACCACGCTGGAGCTGACCAGCACCTACAACGGCGAAGTCCGCCGCGGTGACCGCGTCCTTCCTGA
ATATGACCCGATGCTGCCGACTCTGTTCTATCCGACCAGCGCTGAAAACATTACCGCAGGCGGCAGCATTGTCCGCGTGC
TTGGCTCTATCGGCACGGCAGCGGCGCACAGCGTAGTGACCATTGACCGCGGTACGCTTCACGGCGTGCAAACCGGCCAT
GTATTCAGCGTCAATCAGAAAGGCGAAACCGTTACCGATCCGAAAACCAAAGAGCGCATTCAGCTTCCGGGCCAGCGCAT
CGGCAGCGTCATGGTGTTCAAGGCTTTTGACAATCTGAGCTACGCCTATGTGCTGGACAGCGAACTGCCGATTAAAGTGG
GCGCAGGCATTCAGCCGCCGCTTTTGGATGAATGA

Domains

Predicted by InterproScan.

LysM domain (LysM)

(58-102)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3B7PVS3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

65.714

100

0.659

Multiple sequence alignment