Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilP   Type   Machinery gene
Locus tag   BEN74_RS09285 Genome accession   NZ_CP032279
Coordinates   1594934..1595461 (-) Length   175 a.a.
NCBI ID   WP_068912893.1    Uniprot ID   A0A3B7PPK6
Organism   Acinetobacter sp. WCHAc010034     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1589934..1600461
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BEN74_RS09265 (BEN74_09265) - 1590198..1591019 (-) 822 WP_068912889.1 hypothetical protein -
  BEN74_RS09270 (BEN74_09270) aroB 1591064..1592143 (-) 1080 WP_068913002.1 3-dehydroquinate synthase -
  BEN74_RS09275 (BEN74_09275) aroK 1592161..1592706 (-) 546 WP_068912890.1 shikimate kinase AroK -
  BEN74_RS09280 (BEN74_09280) pilQ 1592743..1594872 (-) 2130 WP_416240769.1 type IV pilus secretin PilQ Machinery gene
  BEN74_RS09285 (BEN74_09285) pilP 1594934..1595461 (-) 528 WP_068912893.1 pilus assembly protein PilP Machinery gene
  BEN74_RS09290 (BEN74_09290) pilO 1595461..1596207 (-) 747 WP_068912896.1 type 4a pilus biogenesis protein PilO Machinery gene
  BEN74_RS09295 (BEN74_09295) pilN 1596204..1596869 (-) 666 WP_068912899.1 PilN domain-containing protein Machinery gene
  BEN74_RS09300 (BEN74_09300) comM 1596869..1597891 (-) 1023 WP_068912902.1 pilus assembly protein PilM Machinery gene

Sequence

Protein


Download         Length: 175 a.a.        Molecular weight: 19198.38 Da        Isoelectric Point: 8.8493

>NTDB_id=314701 BEN74_RS09285 WP_068912893.1 1594934..1595461(-) (pilP) [Acinetobacter sp. WCHAc010034]
MKIKKISMFVMLGAALAGCESRIDAVNQEMANIRNQPPIAIEPAPDFVPAETFIYAAQQLKSPFLPNSLATELKIMAGKR
VYPNFSRQPQPLESYALESLNMKGSLRSQAGNVLALIQTPDGQIERVQLGSYMGLNHGRIVKITPTQIDVVEIIPDGREG
YVERPRSLILIGPAP

Nucleotide


Download         Length: 528 bp        

>NTDB_id=314701 BEN74_RS09285 WP_068912893.1 1594934..1595461(-) (pilP) [Acinetobacter sp. WCHAc010034]
ATGAAAATTAAAAAAATTTCTATGTTTGTGATGCTTGGCGCTGCTTTGGCAGGCTGTGAGTCACGCATTGACGCCGTGAA
TCAGGAAATGGCGAATATCCGCAACCAGCCGCCGATTGCGATTGAGCCGGCGCCGGATTTTGTCCCGGCAGAAACATTTA
TTTATGCAGCGCAGCAGCTGAAAAGCCCATTCCTGCCGAACTCCTTGGCGACGGAACTGAAAATCATGGCGGGCAAGCGC
GTTTATCCGAATTTCAGCCGCCAGCCTCAGCCGCTGGAAAGCTATGCGCTGGAAAGCCTGAATATGAAAGGCAGCCTGCG
CAGCCAGGCCGGCAATGTTCTGGCGCTGATACAGACGCCGGATGGCCAGATTGAACGGGTTCAGCTCGGCAGCTATATGG
GGCTCAATCACGGCCGGATTGTAAAAATTACACCGACGCAAATTGATGTGGTTGAGATTATTCCAGATGGGCGGGAAGGC
TATGTTGAGCGTCCTAGAAGCCTCATATTGATTGGACCGGCACCTTAA

Domains

Predicted by InterproScan.

Pilus assembly protein, PilP (PilP)

(27-170)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3B7PPK6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilP Acinetobacter baumannii D1279779

76

100

0.76
  comL Acinetobacter baylyi ADP1

68.263

95.429

0.651

Multiple sequence alignment