Detailed information NTG0314088

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: LL1196_RS09565
• Genome accession: NZ_CP032148
• Coordinates: 1853215..1854198 (-)
• Length: 327 a.a.
• NCBI ID: WP_021211801.1
• Uniprot ID: A0A896TBW3
• Organism: Lactococcus cremoris strain 1196
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1848215..1859198

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LL1196_RS09550 (LL1196_1929)	-	1849567..1850493 (-)	927	WP_014572243.1	peptidyl-prolyl cis-trans isomerase	-
LL1196_RS09555 (LL1196_1930)	-	1850649..1851332 (-)	684	WP_021215824.1	O-methyltransferase	-
LL1196_RS09560 (LL1196_1931)	pepF	1851335..1853140 (-)	1806	WP_021165608.1	oligoendopeptidase F	Regulator
LL1196_RS09565 (LL1196_1932)	coiA	1853215..1854198 (-)	984	WP_021211801.1	competence protein CoiA	Machinery gene
LL1196_RS09570 (LL1196_1933)	-	1854273..1855358 (-)	1086	WP_014572240.1	YdcF family protein	-
LL1196_RS09575 (LL1196_1934)	-	1855512..1856099 (-)	588	WP_014572239.1	alpha/beta hydrolase	-
LL1196_RS09580 (LL1196_03540)	-	1856138..1856335 (-)	198	WP_250638141.1	alpha/beta hydrolase	-
LL1196_RS09585 (LL1196_1935)	-	1856568..1857989 (-)	1422	WP_011676727.1	NCS2 family permease	-
LL1196_RS09590 (LL1196_1936)	-	1858295..1859131 (+)	837	WP_011676728.1	Cof-type HAD-IIB family hydrolase	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 39138.89 Da
• Isoelectric Point: 9.6994

>NTDB_id=314088 LL1196_RS09565 WP_021211801.1 1853215..1854198(-) (coiA) [Lactococcus cremoris strain 1196]
MLTAIDENNKIINLLELERKELTGKFYCPSCHAELLIKNGQIKVLHFAHKSLKSCNLWLENESEQHLGLKKILYQWFKRT
DKVEIERYLPELNQRPDLLVNDKIAIEIQCSHLSIKRLKERTENYKAHGFKVLWLMGKDLWLAEQVTKLQKNLVYFSENR
GFFYWELDFQRKKLRLKSLIHEDLRGRIICLQEEIPFGKGRLIAHLRLPYLAQKLVKIPTFKDPKLSSFIRQQLYYQSLK
WMKIQEKYYQKGENLLTKKFEGPYIAPLGLNLLESFTDEMTITTFTQIDQNVKLYYENFLIDFQRNSLEMLYPPCFYAIM
GKQKKEK

Nucleotide

• Length: 984 bp

>NTDB_id=314088 LL1196_RS09565 WP_021211801.1 1853215..1854198(-) (coiA) [Lactococcus cremoris strain 1196]
ATGCTGACAGCAATTGATGAAAATAATAAAATAATAAACTTACTGGAATTAGAACGCAAAGAATTGACCGGGAAATTTTA
TTGTCCTTCTTGTCATGCAGAGCTACTTATTAAAAATGGGCAGATAAAAGTTCTTCATTTTGCCCATAAATCTCTAAAGA
GCTGCAATTTATGGTTGGAAAATGAGTCAGAACAGCATTTAGGTTTGAAAAAAATATTATATCAGTGGTTTAAAAGGACT
GACAAAGTCGAAATTGAACGCTATTTGCCCGAACTTAACCAAAGACCAGATTTATTAGTAAATGACAAAATCGCTATTGA
GATACAATGCTCTCATTTATCTATTAAGCGCCTCAAAGAACGTACAGAAAATTATAAGGCGCATGGCTTTAAAGTGCTTT
GGTTGATGGGAAAGGATTTATGGCTGGCTGAACAGGTGACAAAACTTCAAAAAAATTTAGTTTATTTCTCGGAAAATAGA
GGATTCTTTTATTGGGAGTTAGATTTTCAGAGGAAAAAATTAAGATTAAAATCTCTTATTCATGAGGATTTACGCGGCAG
AATCATTTGCTTACAAGAGGAAATTCCTTTTGGAAAAGGACGACTTATTGCGCATCTACGCTTACCTTATTTGGCGCAAA
AACTGGTGAAAATTCCTACTTTTAAAGATCCTAAACTTTCTAGTTTTATTCGTCAGCAATTATACTATCAATCACTAAAA
TGGATGAAAATTCAAGAAAAATATTATCAAAAAGGAGAAAATTTACTGACGAAAAAATTTGAAGGTCCATACATTGCTCC
ACTAGGTTTAAATTTACTAGAGAGTTTTACTGACGAAATGACGATCACAACTTTTACTCAGATTGATCAAAATGTTAAGC
TTTACTATGAAAATTTTTTAATAGATTTCCAAAGAAATAGCCTTGAAATGCTCTATCCTCCCTGTTTCTATGCTATAATG
GGAAAGCAGAAAAAGGAAAAATAA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (1-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Lactococcus lactis subsp. cremoris KW2	96.636	100	0.966
coiA	Streptococcus mitis NCTC 12261	44.136	99.083	0.437
coiA	Streptococcus pneumoniae TIGR4	43.519	99.083	0.431
coiA	Streptococcus pneumoniae Rx1	43.519	99.083	0.431
coiA	Streptococcus pneumoniae D39	43.519	99.083	0.431
coiA	Streptococcus pneumoniae R6	43.519	99.083	0.431