Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | CDG60_RS16750 | Genome accession | NZ_CP032134 |
| Coordinates | 3312681..3313205 (-) | Length | 174 a.a. |
| NCBI ID | WP_087512127.1 | Uniprot ID | A0A3B7LYR3 |
| Organism | Acinetobacter chinensis strain WCHAc010005 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3307681..3318205
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDG60_RS16730 (CDG60_16730) | - | 3307982..3308809 (-) | 828 | WP_087512131.1 | hypothetical protein | - |
| CDG60_RS16735 (CDG60_16735) | aroB | 3308820..3309899 (-) | 1080 | WP_087512130.1 | 3-dehydroquinate synthase | - |
| CDG60_RS16740 (CDG60_16740) | aroK | 3309925..3310464 (-) | 540 | WP_087512129.1 | shikimate kinase AroK | - |
| CDG60_RS16745 (CDG60_16745) | pilQ | 3310500..3312620 (-) | 2121 | WP_171405530.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| CDG60_RS16750 (CDG60_16750) | pilP | 3312681..3313205 (-) | 525 | WP_087512127.1 | pilus assembly protein PilP | Machinery gene |
| CDG60_RS16755 (CDG60_16755) | pilO | 3313205..3313924 (-) | 720 | WP_087512126.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| CDG60_RS16760 (CDG60_16760) | pilN | 3313921..3314589 (-) | 669 | WP_087512125.1 | PilN domain-containing protein | Machinery gene |
| CDG60_RS16765 (CDG60_16765) | pilM | 3314589..3315647 (-) | 1059 | WP_087512124.1 | pilus assembly protein PilM | Machinery gene |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 19047.06 Da Isoelectric Point: 7.1658
>NTDB_id=313841 CDG60_RS16750 WP_087512127.1 3312681..3313205(-) (pilP) [Acinetobacter chinensis strain WCHAc010005]
MKTKISLALVAGLLLAGCDSRIDAVNQQMADIRNQPPIPIEAAPVFEPAPTFNYSAHQLKSPFMPSSLAAELKIMAGKRV
YPNLNRQPQPLESYALEALNMKGSMRSQTGEVLALIQTPDGEVERVQRGSYMGMNHGRVVNITPTQIDLLEIIPDGREGY
VERPRSLVLIGPTP
MKTKISLALVAGLLLAGCDSRIDAVNQQMADIRNQPPIPIEAAPVFEPAPTFNYSAHQLKSPFMPSSLAAELKIMAGKRV
YPNLNRQPQPLESYALEALNMKGSMRSQTGEVLALIQTPDGEVERVQRGSYMGMNHGRVVNITPTQIDLLEIIPDGREGY
VERPRSLVLIGPTP
Nucleotide
Download Length: 525 bp
>NTDB_id=313841 CDG60_RS16750 WP_087512127.1 3312681..3313205(-) (pilP) [Acinetobacter chinensis strain WCHAc010005]
ATGAAAACAAAAATTTCTCTCGCTTTAGTTGCAGGTCTGTTGCTGGCAGGCTGTGATTCGCGTATTGATGCAGTGAATCA
GCAGATGGCGGATATCCGTAATCAGCCACCGATTCCAATCGAAGCTGCACCAGTGTTTGAACCTGCGCCAACATTTAACT
ATTCGGCACATCAGCTGAAAAGTCCATTTATGCCAAGTTCGCTGGCTGCAGAGCTGAAAATTATGGCGGGGAAACGGGTT
TATCCAAACCTGAACAGACAGCCTCAGCCACTTGAAAGCTATGCACTTGAAGCACTGAATATGAAAGGCAGTATGCGCAG
TCAGACGGGTGAAGTGCTTGCTCTGATTCAGACGCCGGATGGTGAGGTTGAGCGTGTGCAGCGTGGCAGTTATATGGGGA
TGAATCATGGTCGTGTGGTGAATATCACGCCTACGCAGATTGACCTTTTGGAAATTATTCCGGATGGGCGTGAGGGCTAT
GTGGAACGGCCGAGAAGCTTGGTGTTAATAGGACCAACGCCTTAA
ATGAAAACAAAAATTTCTCTCGCTTTAGTTGCAGGTCTGTTGCTGGCAGGCTGTGATTCGCGTATTGATGCAGTGAATCA
GCAGATGGCGGATATCCGTAATCAGCCACCGATTCCAATCGAAGCTGCACCAGTGTTTGAACCTGCGCCAACATTTAACT
ATTCGGCACATCAGCTGAAAAGTCCATTTATGCCAAGTTCGCTGGCTGCAGAGCTGAAAATTATGGCGGGGAAACGGGTT
TATCCAAACCTGAACAGACAGCCTCAGCCACTTGAAAGCTATGCACTTGAAGCACTGAATATGAAAGGCAGTATGCGCAG
TCAGACGGGTGAAGTGCTTGCTCTGATTCAGACGCCGGATGGTGAGGTTGAGCGTGTGCAGCGTGGCAGTTATATGGGGA
TGAATCATGGTCGTGTGGTGAATATCACGCCTACGCAGATTGACCTTTTGGAAATTATTCCGGATGGGCGTGAGGGCTAT
GTGGAACGGCCGAGAAGCTTGGTGTTAATAGGACCAACGCCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
76.571 |
100 |
0.77 |
| comL | Acinetobacter baylyi ADP1 |
68.966 |
100 |
0.69 |