Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilO   Type   Machinery gene
Locus tag   AhaeAN59_RS01715 Genome accession   NZ_CP031972
Coordinates   367711..368421 (+) Length   236 a.a.
NCBI ID   WP_005088515.1    Uniprot ID   -
Organism   Acinetobacter haemolyticus strain AN59     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 362711..373421
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AhaeAN59_RS01700 (AhaeAN59_01740) ponA 363257..365848 (-) 2592 WP_026070395.1 penicillin-binding protein PBP1a -
  AhaeAN59_RS01705 (AhaeAN59_01745) comM 366012..367070 (+) 1059 WP_004641327.1 pilus assembly protein PilM Machinery gene
  AhaeAN59_RS01710 (AhaeAN59_01750) pilN 367070..367714 (+) 645 WP_004641325.1 PilN domain-containing protein Machinery gene
  AhaeAN59_RS01715 (AhaeAN59_01755) pilO 367711..368421 (+) 711 WP_005088515.1 type 4a pilus biogenesis protein PilO Machinery gene
  AhaeAN59_RS01720 (AhaeAN59_01760) pilP 368421..368948 (+) 528 WP_005088514.1 pilus assembly protein PilP Machinery gene
  AhaeAN59_RS01725 (AhaeAN59_01765) pilQ 369010..371142 (+) 2133 WP_171265847.1 type IV pilus secretin PilQ family protein Machinery gene
  AhaeAN59_RS01730 (AhaeAN59_01770) aroK 371181..371723 (+) 543 WP_005087029.1 shikimate kinase AroK -
  AhaeAN59_RS01735 (AhaeAN59_01775) aroB 371744..372829 (+) 1086 WP_125502217.1 3-dehydroquinate synthase -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 26963.54 Da        Isoelectric Point: 4.8810

>NTDB_id=312996 AhaeAN59_RS01715 WP_005088515.1 367711..368421(+) (pilO) [Acinetobacter haemolyticus strain AN59]
MSQDELNDLNQEGAAVKKKKMTVEQFFQQFNTLDMNNYGSWPWSVKVTCWIFILLAVAALGYFVVIQKQLQTIANAEARE
QSLLNEFREKESKLRNLQQYQTQLQEMEANFNQQLEQLPKETEIPSLVEDMNLTGVNSGLKFKNIRLEKEVRQEFFIEQP
ISLEATGDYHAFGAFATGIAALPRIVTLHDFIVEAKEDTQKKSDIPVVHYTVKAKTYRYVGADDQVDSTAVSGGQR

Nucleotide


Download         Length: 711 bp        

>NTDB_id=312996 AhaeAN59_RS01715 WP_005088515.1 367711..368421(+) (pilO) [Acinetobacter haemolyticus strain AN59]
ATGAGTCAAGATGAACTAAATGATCTCAATCAAGAAGGCGCAGCTGTAAAGAAAAAGAAAATGACAGTTGAGCAATTTTT
TCAGCAATTTAATACTTTAGATATGAACAACTATGGCAGTTGGCCATGGTCGGTAAAAGTGACGTGTTGGATTTTTATTT
TACTCGCTGTTGCGGCATTAGGTTATTTCGTTGTGATCCAAAAGCAGCTACAGACGATAGCTAATGCTGAAGCGCGTGAA
CAAAGTCTATTAAATGAGTTTAGAGAAAAGGAATCTAAATTACGTAACTTGCAGCAATACCAAACTCAATTGCAAGAAAT
GGAAGCGAATTTTAATCAACAGCTTGAGCAGTTGCCAAAAGAAACTGAAATTCCGAGTTTGGTTGAGGATATGAACTTAA
CTGGGGTAAATTCGGGTCTGAAATTTAAAAATATTCGTTTAGAAAAAGAAGTTAGACAAGAGTTCTTCATTGAGCAACCA
ATTAGTCTGGAAGCAACAGGCGATTATCATGCCTTCGGTGCTTTTGCGACAGGTATTGCCGCTTTGCCTCGAATCGTAAC
TTTGCATGATTTTATCGTCGAAGCGAAAGAAGATACTCAGAAAAAATCTGATATCCCTGTTGTCCATTATACGGTTAAAG
CAAAAACTTATCGTTATGTTGGGGCGGATGATCAGGTTGATAGCACTGCTGTTTCAGGAGGGCAACGCTAA

Domains

Predicted by InterproScan.

Pilus assembly protein, PilO (PilO)

(73-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilO Acinetobacter baumannii D1279779

73.913

97.458

0.72
  comO Acinetobacter baylyi ADP1

71.429

97.881

0.699

Multiple sequence alignment