Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilN   Type   Machinery gene
Locus tag   AhaeAN59_RS01710 Genome accession   NZ_CP031972
Coordinates   367070..367714 (+) Length   214 a.a.
NCBI ID   WP_004641325.1    Uniprot ID   N9GL44
Organism   Acinetobacter haemolyticus strain AN59     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 362070..372714
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AhaeAN59_RS01695 (AhaeAN59_01735) - 362410..363228 (+) 819 WP_125502219.1 putative RNA methyltransferase -
  AhaeAN59_RS01700 (AhaeAN59_01740) ponA 363257..365848 (-) 2592 WP_026070395.1 penicillin-binding protein PBP1a -
  AhaeAN59_RS01705 (AhaeAN59_01745) comM 366012..367070 (+) 1059 WP_004641327.1 pilus assembly protein PilM Machinery gene
  AhaeAN59_RS01710 (AhaeAN59_01750) pilN 367070..367714 (+) 645 WP_004641325.1 PilN domain-containing protein Machinery gene
  AhaeAN59_RS01715 (AhaeAN59_01755) pilO 367711..368421 (+) 711 WP_005088515.1 type 4a pilus biogenesis protein PilO Machinery gene
  AhaeAN59_RS01720 (AhaeAN59_01760) pilP 368421..368948 (+) 528 WP_005088514.1 pilus assembly protein PilP Machinery gene
  AhaeAN59_RS01725 (AhaeAN59_01765) pilQ 369010..371142 (+) 2133 WP_171265847.1 type IV pilus secretin PilQ family protein Machinery gene
  AhaeAN59_RS01730 (AhaeAN59_01770) aroK 371181..371723 (+) 543 WP_005087029.1 shikimate kinase AroK -

Sequence


Protein


Download         Length: 214 a.a.        Molecular weight: 23956.37 Da        Isoelectric Point: 6.0102

>NTDB_id=312995 AhaeAN59_RS01710 WP_004641325.1 367070..367714(+) (pilN) [Acinetobacter haemolyticus strain AN59]
MAKINLLPWRDELREQRKKQFIAFCVGVAALGIASVFTAWMYFDHKLNDQEQANQFIVSTNQNLDVQLKSLEGLQERRNA
IIERMKLIQGLQGQRPVIVRLVDELVRVTPPTMYITKFTRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMNSFLA
SEEKKDKAVSSLVPRVEENYGSFVVTVDLGEIGTTVTTDPASESAASVTVGGAQ

Nucleotide


Download         Length: 645 bp        

>NTDB_id=312995 AhaeAN59_RS01710 WP_004641325.1 367070..367714(+) (pilN) [Acinetobacter haemolyticus strain AN59]
ATGGCAAAGATTAACTTACTCCCTTGGCGTGATGAGCTAAGAGAACAAAGAAAGAAACAATTTATTGCATTTTGTGTTGG
GGTGGCTGCTTTAGGAATCGCATCTGTATTTACAGCATGGATGTATTTTGATCACAAGCTGAATGATCAAGAACAAGCAA
ACCAGTTTATTGTGAGTACCAATCAAAACTTAGATGTTCAACTGAAGTCATTAGAGGGATTGCAAGAGCGTCGCAATGCG
ATTATTGAACGCATGAAGTTGATTCAAGGACTGCAAGGACAACGACCAGTCATTGTACGTTTGGTTGATGAGTTGGTGCG
TGTAACCCCTCCAACAATGTACATCACTAAGTTTACGCGTACAGGTGATAAATTTACCATCGAAGGAAAAGCAGAGAGTC
CAAATACCGTTGCCGAGCTGTTACGAAATTTGGAAGCTTCACCTTGGTATCGTAACGCATTTATGAATTCGTTTTTGGCA
TCAGAAGAGAAAAAAGATAAAGCCGTTAGCTCTTTAGTTCCTCGTGTCGAAGAAAATTATGGCAGTTTCGTTGTTACTGT
AGACTTGGGTGAAATTGGAACCACGGTGACAACTGATCCTGCTTCAGAATCAGCTGCATCAGTAACAGTGGGAGGCGCAC
AATGA

Domains


Predicted by InterproScan.

(100-167)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB N9GL44

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilN Acinetobacter baumannii D1279779

78.972

100

0.79

  comN Acinetobacter baylyi ADP1

71.905

98.131

0.706


Multiple sequence alignment