Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | D1367_RS02650 | Genome accession | NZ_CP031941 |
| Coordinates | 563690..564055 (-) | Length | 121 a.a. |
| NCBI ID | WP_069073698.1 | Uniprot ID | A0A2D0HCN5 |
| Organism | Nostoc sphaeroides strain Kutzing En | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 558690..569055
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D1367_RS02640 | - | 560201..563149 (-) | 2949 | WP_420845965.1 | methyl-accepting chemotaxis protein | - |
| D1367_RS02645 | - | 563146..563676 (-) | 531 | WP_118162516.1 | chemotaxis protein CheW | - |
| D1367_RS02650 | pilH | 563690..564055 (-) | 366 | WP_069073698.1 | response regulator transcription factor | Machinery gene |
| D1367_RS02655 | - | 564317..565495 (-) | 1179 | WP_118162518.1 | response regulator | - |
| D1367_RS02660 | hmpF | 565875..567632 (+) | 1758 | WP_118162521.1 | pilus motility taxis protein HmpF | - |
| D1367_RS02665 | - | 567746..568147 (-) | 402 | WP_118162523.1 | helix-turn-helix domain-containing protein | - |
| D1367_RS02670 | - | 568131..568430 (-) | 300 | WP_118162526.1 | type II toxin-antitoxin system HigB family toxin | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13350.52 Da Isoelectric Point: 4.8604
>NTDB_id=312835 D1367_RS02650 WP_069073698.1 563690..564055(-) (pilH) [Nostoc sphaeroides strain Kutzing En]
MSTVLIVEDSIAQREMITDLLKATGLTVTHASDGLEALEAIQIAPPDLVVLDIVMPRMNGYEVCRRLKSDPKTQNVPVVM
CSSKGEEFDRYWGMKQGADAYIAKPFQPTELVGTVKQLLRG
MSTVLIVEDSIAQREMITDLLKATGLTVTHASDGLEALEAIQIAPPDLVVLDIVMPRMNGYEVCRRLKSDPKTQNVPVVM
CSSKGEEFDRYWGMKQGADAYIAKPFQPTELVGTVKQLLRG
Nucleotide
Download Length: 366 bp
>NTDB_id=312835 D1367_RS02650 WP_069073698.1 563690..564055(-) (pilH) [Nostoc sphaeroides strain Kutzing En]
ATGAGTACAGTTCTGATAGTGGAAGACAGTATCGCGCAACGGGAGATGATTACAGACCTCCTGAAAGCAACTGGACTAAC
AGTAACCCATGCCAGTGACGGATTAGAAGCATTGGAGGCAATTCAAATAGCACCTCCCGATTTAGTGGTATTGGATATTG
TCATGCCCCGAATGAACGGCTACGAAGTTTGTCGGCGCTTAAAATCCGATCCAAAAACCCAAAATGTCCCTGTGGTGATG
TGTTCTTCCAAAGGCGAAGAATTTGATCGTTATTGGGGCATGAAGCAGGGTGCAGACGCTTACATAGCCAAACCGTTTCA
ACCAACCGAGTTGGTGGGAACAGTCAAACAACTGCTGCGAGGATAA
ATGAGTACAGTTCTGATAGTGGAAGACAGTATCGCGCAACGGGAGATGATTACAGACCTCCTGAAAGCAACTGGACTAAC
AGTAACCCATGCCAGTGACGGATTAGAAGCATTGGAGGCAATTCAAATAGCACCTCCCGATTTAGTGGTATTGGATATTG
TCATGCCCCGAATGAACGGCTACGAAGTTTGTCGGCGCTTAAAATCCGATCCAAAAACCCAAAATGTCCCTGTGGTGATG
TGTTCTTCCAAAGGCGAAGAATTTGATCGTTATTGGGGCATGAAGCAGGGTGCAGACGCTTACATAGCCAAACCGTTTCA
ACCAACCGAGTTGGTGGGAACAGTCAAACAACTGCTGCGAGGATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
76.86 |
100 |
0.769 |
| micA | Streptococcus pneumoniae Cp1015 |
39.167 |
99.174 |
0.388 |
| pilG | Acinetobacter baumannii strain A118 |
41.228 |
94.215 |
0.388 |
| vicR | Streptococcus mutans UA159 |
38.333 |
99.174 |
0.38 |
| pilL-C | Synechocystis sp. PCC 6803 |
37.5 |
99.174 |
0.372 |