Detailed information NTG0312316

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: D1O36_RS01490
• Genome accession: NZ_CP031881
• Coordinates: 264697..265305 (+)
• Length: 202 a.a.
• NCBI ID: WP_255136095.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain ST106
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IScluster/Tn	263342..264518	264697..265305	flank	179

Gene organization within MGE regions

Location: 263342..265305

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D1O36_RS01485 (D1O36_01485)	-	263342..264518 (+)	1177	Protein_239	IS256-like element IS1191 family transposase	-
D1O36_RS01490 (D1O36_01490)	comA	264697..265305 (+)	609	WP_255136095.1	ATP-binding cassette domain-containing protein	Regulator

Sequence

Protein

• Length: 202 a.a.
• Molecular weight: 22109.37 Da
• Isoelectric Point: 6.8735

>NTDB_id=312316 D1O36_RS01490 WP_255136095.1 264697..265305(+) (comA) [Streptococcus thermophilus strain ST106]
MDLTINKGEKIAIMGQSSSGKTTLAKISSGYYTKSSGHVSLDKASISQAELRQLVTYVPQQTYVFMGTILENLLLGLEGE
VDEHLILKVCEQADILADIQKMPLGFQTQVSEDGGLSGGQKQRLAIARALLSNQPILIFDEATSGLDRETESRVMANLSK
LTRTMIFIAHRSSVYQHVSRVVTMANGKLEAASPNFNPFQFI

Nucleotide

• Length: 609 bp

>NTDB_id=312316 D1O36_RS01490 WP_255136095.1 264697..265305(+) (comA) [Streptococcus thermophilus strain ST106]
ATTGATTTGACGATTAATAAGGGAGAGAAAATTGCCATCATGGGTCAGAGTAGTTCTGGGAAAACGACTTTAGCGAAGAT
TTCGTCAGGTTATTACACAAAATCTAGTGGTCATGTAAGCCTAGACAAAGCTTCTATTAGCCAAGCGGAGTTGCGCCAGT
TGGTGACCTATGTTCCACAACAGACCTATGTCTTTATGGGAACAATATTAGAAAATTTATTGTTAGGCCTTGAAGGAGAA
GTTGATGAGCATCTTATTCTGAAAGTCTGTGAACAAGCCGATATTTTGGCTGATATTCAAAAGATGCCCCTAGGTTTTCA
GACCCAAGTATCTGAAGATGGAGGTCTGTCTGGCGGTCAAAAACAAAGATTAGCTATAGCAAGGGCTCTCTTGTCCAATC
AACCAATCTTGATTTTTGATGAAGCTACAAGTGGTCTGGACAGGGAAACTGAAAGTAGAGTAATGGCCAATCTTTCTAAA
CTGACACGAACAATGATTTTCATTGCTCACCGTAGCAGTGTCTACCAACATGTCAGTCGTGTAGTGACTATGGCAAATGG
GAAGCTTGAAGCAGCTAGTCCCAACTTCAATCCATTCCAGTTCATTTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (2-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis SK321	50.259	95.545	0.48
comA	Streptococcus pneumoniae Rx1	49.223	95.545	0.47
comA	Streptococcus pneumoniae D39	49.223	95.545	0.47
comA	Streptococcus pneumoniae R6	49.223	95.545	0.47
comA	Streptococcus mitis NCTC 12261	49.223	95.545	0.47
comA	Streptococcus pneumoniae TIGR4	48.705	95.545	0.465
comA	Streptococcus gordonii str. Challis substr. CH1	48.187	95.545	0.46
comA/nlmT	Streptococcus mutans UA159	46.114	95.545	0.441