Detailed information
Bioinformatically predicted
Overview
| Name | rcrQ | Type | Regulator |
| Locus tag | HYN24_RS16060 | Genome accession | NZ_CP031842 |
| Coordinates | 158563..158826 (+) | Length | 87 a.a. |
| NCBI ID | WP_240327796.1 | Uniprot ID | - |
| Organism | Dechloromonas sp. HYN0024 | ||
| Function | regulate competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 153563..163826
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HYN24_RS00760 (HYN24_00760) | cobU | 153803..154372 (-) | 570 | WP_117607508.1 | bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | - |
| HYN24_RS00765 (HYN24_00765) | cobT | 154660..155712 (+) | 1053 | WP_117610148.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | - |
| HYN24_RS00770 (HYN24_00770) | - | 155718..156479 (+) | 762 | WP_117607509.1 | adenosylcobinamide-GDP ribazoletransferase | - |
| HYN24_RS00775 (HYN24_00775) | cobC | 156476..157018 (+) | 543 | WP_117607510.1 | alpha-ribazole phosphatase family protein | - |
| HYN24_RS00780 (HYN24_00780) | - | 157199..158526 (+) | 1328 | Protein_154 | ABC transporter transmembrane domain-containing protein | - |
| HYN24_RS16060 | rcrQ | 158563..158826 (+) | 264 | WP_240327796.1 | hypothetical protein | Regulator |
| HYN24_RS00785 (HYN24_00785) | - | 158951..159838 (+) | 888 | WP_117607511.1 | DUF6492 family protein | - |
| HYN24_RS00790 (HYN24_00790) | - | 159835..160491 (-) | 657 | WP_117607512.1 | bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG | - |
| HYN24_RS00795 (HYN24_00795) | - | 160533..161867 (+) | 1335 | WP_205421417.1 | glycosyltransferase | - |
| HYN24_RS00800 (HYN24_00800) | - | 161864..162802 (+) | 939 | WP_117607514.1 | glycosyltransferase family 2 protein | - |
Sequence
Protein
Download Length: 87 a.a. Molecular weight: 9513.93 Da Isoelectric Point: 5.0484
>NTDB_id=311782 HYN24_RS16060 WP_240327796.1 158563..158826(+) (rcrQ) [Dechloromonas sp. HYN0024]
MILDEATSALDTESERLIQAALDTLILGRTTIVIAHRLSTIERADLIVVLDQGRIVERGRHAELLALDGVYAKLQRLQHD
NVGSLAG
MILDEATSALDTESERLIQAALDTLILGRTTIVIAHRLSTIERADLIVVLDQGRIVERGRHAELLALDGVYAKLQRLQHD
NVGSLAG
Nucleotide
Download Length: 264 bp
>NTDB_id=311782 HYN24_RS16060 WP_240327796.1 158563..158826(+) (rcrQ) [Dechloromonas sp. HYN0024]
TTGATTCTCGATGAGGCGACTTCGGCCCTTGATACCGAATCCGAACGTCTGATCCAGGCCGCCTTGGACACACTGATTCT
TGGCCGGACGACTATCGTGATTGCCCACCGCCTGTCGACCATCGAACGTGCAGACCTGATTGTGGTGCTGGATCAGGGGC
GCATCGTCGAGCGCGGCAGGCATGCGGAGTTGTTGGCGCTTGATGGGGTGTATGCCAAATTACAGCGTTTGCAGCACGAT
AACGTTGGTTCCCTGGCTGGCTGA
TTGATTCTCGATGAGGCGACTTCGGCCCTTGATACCGAATCCGAACGTCTGATCCAGGCCGCCTTGGACACACTGATTCT
TGGCCGGACGACTATCGTGATTGCCCACCGCCTGTCGACCATCGAACGTGCAGACCTGATTGTGGTGCTGGATCAGGGGC
GCATCGTCGAGCGCGGCAGGCATGCGGAGTTGTTGGCGCTTGATGGGGTGTATGCCAAATTACAGCGTTTGCAGCACGAT
AACGTTGGTTCCCTGGCTGGCTGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rcrQ | Streptococcus mutans UA159 |
57.692 |
89.655 |
0.517 |
| comA | Streptococcus pneumoniae TIGR4 |
57.333 |
86.207 |
0.494 |
| comA | Streptococcus pneumoniae Rx1 |
57.333 |
86.207 |
0.494 |
| comA | Streptococcus pneumoniae D39 |
57.333 |
86.207 |
0.494 |
| comA | Streptococcus pneumoniae R6 |
57.333 |
86.207 |
0.494 |
| comA | Streptococcus mitis NCTC 12261 |
56 |
86.207 |
0.483 |
| comA | Streptococcus mitis SK321 |
54.667 |
86.207 |
0.471 |
| comA | Streptococcus gordonii str. Challis substr. CH1 |
52.703 |
85.057 |
0.448 |
| comA/nlmT | Streptococcus mutans UA159 |
50 |
85.057 |
0.425 |