Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGC   Type   Machinery gene
Locus tag   D0819_RS08330 Genome accession   NZ_CP031784
Coordinates   1590591..1590887 (-) Length   98 a.a.
NCBI ID   WP_003230162.1    Uniprot ID   A0A809FGR8
Organism   Bacillus subtilis strain HMNig-2     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1585591..1595887
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D0819_RS08285 (D0819_08300) tasA 1585998..1586783 (-) 786 WP_014477324.1 biofilm matrix protein TasA -
  D0819_RS08290 (D0819_08305) sipW 1586848..1587420 (-) 573 WP_003246088.1 signal peptidase I SipW -
  D0819_RS08295 (D0819_08310) tapA 1587404..1588165 (-) 762 WP_077671431.1 amyloid fiber anchoring/assembly protein TapA -
  D0819_RS08300 (D0819_08315) yqzG 1588436..1588762 (+) 327 WP_021480018.1 YqzG/YhdC family protein -
  D0819_RS08305 (D0819_08320) spoIITA 1588804..1588983 (-) 180 WP_014480252.1 YqzE family protein -
  D0819_RS08310 (D0819_08325) comGG 1589055..1589429 (-) 375 WP_021480019.1 ComG operon protein ComGG Machinery gene
  D0819_RS08315 (D0819_08330) comGF 1589430..1589813 (-) 384 WP_031315212.1 ComG operon protein ComGF Machinery gene
  D0819_RS08320 (D0819_08335) comGE 1589839..1590186 (-) 348 WP_021480020.1 ComG operon protein 5 Machinery gene
  D0819_RS08325 (D0819_08340) comGD 1590170..1590601 (-) 432 WP_021480021.1 comG operon protein ComGD Machinery gene
  D0819_RS08330 (D0819_08345) comGC 1590591..1590887 (-) 297 WP_003230162.1 comG operon protein ComGC Machinery gene
  D0819_RS08335 (D0819_08350) comGB 1590901..1591938 (-) 1038 WP_021480022.1 comG operon protein ComGB Machinery gene
  D0819_RS08340 (D0819_08355) comGA 1591925..1592995 (-) 1071 WP_004399124.1 competence protein ComGA Machinery gene
  D0819_RS21685 - 1593284..1593421 (-) 138 WP_021480024.1 hypothetical protein -
  D0819_RS08350 (D0819_08365) corA 1593423..1594376 (-) 954 WP_015483432.1 magnesium transporter CorA -
  D0819_RS08355 (D0819_08370) yqhB 1594519..1595847 (+) 1329 WP_021480026.1 hemolysin family protein -

Sequence

Protein


Download         Length: 98 a.a.        Molecular weight: 10849.74 Da        Isoelectric Point: 6.7083

>NTDB_id=311377 D0819_RS08330 WP_003230162.1 1590591..1590887(-) (comGC) [Bacillus subtilis strain HMNig-2]
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKKDAV
CPNGKRIIITGGEVKVEH

Nucleotide


Download         Length: 297 bp        

>NTDB_id=311377 D0819_RS08330 WP_003230162.1 1590591..1590887(-) (comGC) [Bacillus subtilis strain HMNig-2]
ATGAATGAGAAAGGATTTACACTTGTTGAAATGTTAATCGTGCTCTTTATTATTTCGATTTTGCTTTTAATTACGATACC
GAACGTCACGAAACATAACCAAACCATTCAAAAAAAGGGCTGTGAAGGCTTACAAAACATGGTTAAGGCACAAATGACTG
CATTTGAGCTTGATCATGAAGGACAAACTCCGAGCCTTGCCGATTTACAGTCAGAGGGCTATGTGAAAAAGGATGCTGTC
TGTCCAAATGGTAAGCGCATTATCATCACCGGCGGAGAAGTTAAGGTTGAACATTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A809FGR8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGC Bacillus subtilis subsp. subtilis str. 168

100

100

1
  comGC Staphylococcus aureus MW2

41.304

93.878

0.388
  comGC Staphylococcus aureus N315

41.304

93.878

0.388
  comYC Streptococcus suis isolate S10

49.333

76.531

0.378

Multiple sequence alignment